Trematomus bernacchii (emerald rockcod): 117489727
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Entry
117489727 CDS
T09643
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117489727 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117489727 (irf6)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117489727 (irf6)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117489727 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117489727
NCBI-ProteinID:
XP_033995140
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MSVTPRRVRLKPWLVSQVSSGRYPGLVWLEREAMRFKIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFHLVYDGTKEVPMNPLKIYDVCDIPQPL
SNQGSSDAGSWTPGDDDGGDEDIPDTPESLPPYPSNGTSPSPLIMWSPMSSGSPMQPSSC
PPSNEVWPKEEPVKIWPKEEPIDVEMHPTPSEMPHAPLPDVPMHPPSLPEVFFASPETWI
SSLPMTDLEVQFLYRGKEMCPTGNISNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPT
TEHITNEKQRIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIE
RQRKIKLFCLESFLSGVIAHQRGQTPIPPLFEINLCFGEEWPDGRPKERKLIMVQIIPVV
ARMISEMFSGDSTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWTLPPGP
GLNIVQAMQAQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacccctcgacgtgtccgcctgaagccctggctggtgtctcaggtgtccagc
gggcgatacccggggctggtgtggcttgagcgcgaggccatgcgcttcaagatcccatgg
aaacacgcgacacgacatacaccgcagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagacggggaagttccaagagggcgttgatgaacctgatcctgccaagtggaaa
gcccagcttcgatgtgctctgaacaaaagcagagagttccacctagtctacgatggcacc
aaagaggtccccatgaatcctctgaagatttatgatgtgtgcgacattccacagcccctc
agtaaccaaggttcctcagatgctggttcttggactccaggtgatgatgatggtggtgac
gaagatattccagatacaccagagtctctccctccgtacccatccaatggtaccagtccc
tctcctctcattatgtggtctcctatgagctctggatcccccatgcaaccttccagttgt
cccccttcaaatgaggtctggcccaaagaggagcctgttaaaatctggcctaaagaggag
cccatagatgtggagatgcaccccacaccgagtgaaatgccccatgctcctctgcctgac
gtcccaatgcatcccccttctctacctgaagtattcttcgcctctccagagacgtggatc
agttccctcccgatgacagacctggaggtgcagttcctgtacagagggaaggagatgtgt
cccacagggaacatcagtaaccctcagggctgcaggctgttctacggagacctcggcccc
atggtcaaccaggaggagctgttcgggccggtgaacctggaacagctacgctttccgacc
acggagcacattaccaacgagaagcagaggattttcactaaccgcctgctggatgtgatg
gacagaggcctcatcctggaggtcagcggtcacgacatctatgcagtgcgtctctgccag
tgcaaggtgtactggtccggtccctgtgctccaaaccctgctgcgccaaatctcatagag
cgccagaggaagatcaaactcttttgcctggagtcttttctcagtggagtaatcgcccac
cagcgtggccagacaccaatccctcctctatttgaaatcaacctatgttttggagaggag
tggcctgatggcaggcccaaagagaggaaacttatcatggttcagattattccagtggtg
gcacgtatgataagcgagatgttttcaggggacagcacgcggtccttcgacagcggcagc
gttcgcctgcagatctcaatcccagatatcaaagacaacatagtgacccacctaaagcag
ctgtactgcctgctgcagacccaccagggccaggacgggtggacattgccccccggcccg
ggcctgaacattgtccaggctatgcaggcacagtga
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