Trematomus bernacchii (emerald rockcod): 117489740
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Entry
117489740 CDS
T09643
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117489740 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117489740 (stx16)
Membrane trafficking [BR:
tben04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
117489740 (stx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
MCPsignal
Syntaxin_2
DUF2116
Orf78
Lzipper-MIP1
DUF6548
T3SS_needle_E
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
117489740
NCBI-ProteinID:
XP_033995156
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MATRRLTDAFLLMRNNAIQNRQILAEQVSTYDPRLSTRSNAAELDELADDRMALVSGISL
DPEAAIGVTKRLPPKWTEGIDEIQYEITRVRQKMKDLALLHDKHMNRPTLDDSSEEEHAI
EITTQEITQMFHRCQRAVTGLQTRCGHCTEQEERLLRNVVSSLAQSLQELSTNFRHTQSG
YLKRMKNREERSKHFFDSGPLMEEDEDLAVYDKGFTDDQLMLVEQNTVMVEEREREIRQI
VQSISDLNEIFRDLAGMVVEQGTVLDRIDFNVEQACVKTEEGVKQLQKAEQYQKKNRKML
VILILFVIVMVLIVILFGTKF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggccactaggcgtctgaccgatgccttcttgttaatgcggaacaatgcgatccaaaac
cggcagatattggctgagcaagtgagtacatacgacccccgtctgagtacacgtagcaat
gctgcggagctcgatgagttggctgacgaccgaatggccctggtgtcagggattagtctg
gatcctgaagcagccatcggcgtcacaaagaggctgcctcccaaatggacagaggggatt
gatgagatccagtatgaaatcactcgggttcggcagaagatgaaggatctggctttactt
catgacaagcatatgaatcgacctacacttgatgacagtagtgaggaagagcatgccata
gaaatcactactcaggagataacacagatgtttcaccggtgccagcgagctgtgacgggg
ctgcagactcgctgtggccactgtaccgagcaggaggagaggctgctgagaaacgtggtg
tcgtcgctggctcagagcctgcaggagctctccaccaacttcaggcacacgcagtctggc
tacttaaaacgtatgaagaatcgtgaggagagatcaaagcacttttttgactctggaccc
ctaatggaagaggatgaagatttagctgtatatgacaaggggttcacagacgaccagctg
atgctggtggagcagaacacagttatggtggaggaacgagagagggagatccgacagata
gtgcagtccatctcagatctgaatgagatattccgggacttggctggaatggtggtggaa
cagggcaccgttctcgacagaattgacttcaatgtggagcaggcttgtgtgaaaacagaa
gagggagtgaaacagttacaaaaggcggaacagtatcagaagaaaaacagaaagatgctg
gtcattttgatcctcttcgtcatagtcatggttctaattgttatactttttggaacaaag
ttttaa
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