Trematomus bernacchii (emerald rockcod): 117489860
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Entry
117489860 CDS
T09643
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04260
Cardiac muscle contraction
tben04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117489860
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117489860
04261 Adrenergic signaling in cardiomyocytes
117489860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117489860
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117489860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
WAK_assoc
dCache_2
Caps_syn_GfcC_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117489860
NCBI-ProteinID:
XP_033995301
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MLGKWSLLFSHMCSSSSSLLLLWTLVGLDVVEVSGSQPGIPLSVVKLWASAFGGEIKSIS
AKYSGSQLLQKDLWAITAPRPGTNSSSEPGSPVKGRINPKNAACLAAWEESGGIRGSPRK
HGESFQTAYRKRLLGPNLGPPCTEKYKEPEKSVRVEEIDGVKLVKNLALKLEEVFWKKAE
ATRRLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGGEFLLEPNDHFNNLS
VNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQY
PGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILIDVSGSMKGLRLTIARQTVSSILD
TLGDDDFFNVIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLKKLFAKGIGLLGVALAE
AFTILNEFNQTGHGSLCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAYA
DNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQA
HKLKDKSGPSLMTTVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYA
FAITNNGYILIHPDLRPLYQDGKKRRKPNYSSVDLSEVEWEDKDDILRNAMVKRRTGTFS
MEVKKTVDGGRRVLKMHNDYFYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQ
PDVALADEWTYCNTEEQHEHRHLTQIQAIKMFMTGRRTHLKCDRELIQEVLFDAVVTAPL
EAYWTGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEEKEGVFNAD
HFPLWYKRAAEQVPGAFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLE
FFQRKFWTACRQCTALDGKCGISCDSADINCYLIDNNAFILVTEEPSQTGLFFGEVEGAV
MNKLLQMGSFKRITLYDYQALCREFARSSDSARSLSNPFTVFKWLLAELVIFLLEFNLYS
WWNVDLSVKAQRPRGKTHMVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSN
LFMVVVDNKCDCSSYPPVTMDPIEIMYNESLKCDRLKYQKDRKKPESCHPFHPEENAMEC
GSASRLSSPLAAALLPLIASTISR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaagtggagcctcctgttctcgcacatgtgcagcagtagcagcagcctgctc
ctgctctggaccctcgttgggctggatgtggtggaggtgtcggggtcccagccagggatc
cctctgtcagtcgtgaagctctgggcttcagcatttggtggagaaataaaatcaatttct
gcaaaatattctggatcccaactccttcaaaaggatctgtgggccatcacagcaccacgt
ccagggaccaactccagctctgagcccggatccccagtcaagggcaggattaacccaaaa
aatgctgcatgcctcgcagcgtgggaggagagcggaggaatcagaggaagtccacgcaaa
catggggagagctttcaaacggcatacagaaagcgactcctgggtccaaacctaggacct
ccttgcactgagaaatataaagaacctgaaaagtcagtcagagttgaagaaattgatggt
gtgaagctggtcaagaacctggctttgaagctggaggaagtgttctggaaaaaagcagag
gcaaccaggcggctggtggaggcagcagaagaagcgcaccatcagcatgaagataatccc
gacctgcagtacgagtacttcaacgccgtgctgatcaatgaggtggacgaggagggcaat
aacgtagagctcggcggagagttcctcctggagcccaacgaccatttcaataacctgtca
gtcaacctgagcctcagcgtggtgcaggtgccgaccaacatgtacaacaaagatcctgat
atagtgaacggagtctactggtccgaggctctgaataaagtatttgtggataattttgaa
agagacccaacgctgatctggcagtactttgggagcgccaaaggtttcttcaggcagtac
cctggagtaaagtggcatccagatgaacatggtgtgattggatttgactgtagaaacagg
aagtggtatattcaagcagcaacgtcccctaaagatgttgtcatcttaatcgatgtgagt
ggaagcatgaaaggactgaggctgaccatcgccaggcagacggtctcctccatattagac
acacttggagatgatgacttcttcaacgtcattgcatataatcaggagatccactatgtg
gagccttgtttgaatggcactctggtccgagccgacaggaccaataaagaccatttccgc
gaacatctgaaaaagctgtttgctaaggggatcgggctgctgggcgtcgctctggctgaa
gcgttcacaatcctgaatgaatttaatcaaactggacatggcagtttgtgcagccaggcc
ataatgctcgtgactgacggggcgacagaaatgtatgacgacgtttttgagaagtacaac
tggccagaaagaaaggtgcgaatattcccatacctgattggacgagagtctgcatatgct
gacaacctcaagtggatggcttgtgccaacaaaggatatttcagtcagatctccacgcta
gcagatgttcaggagaacgtgatgagatatctgcacgtcatgagccgcccgaaggtcatc
gaccacgagcacgacacggtgtggactgaagcttacgtggacagtgctctttcccaggct
cataagttgaaggacaaatcgggcccaagtctgatgaccacagtcgccatgcctgtcttc
agcacaaagaatgaaacgaagaaccaggggattctgttgggggttgcgggaacagacatc
cctctgcaggagctgatgaagcttatccctaaacatatgttaggaatccatgggtacgct
tttgccatcacaaacaacggctacatcctgatacacccggacctcaggcctttgtatcag
gatggcaagaagaggaggaagcccaactacagcagcgtggatctctccgaggtggagtgg
gaagacaaagatgatattctacgaaacgctatggtgaaaagaaggacagggactttctct
atggaggtgaagaagacggtggatggagggaggcgtgtcctgaagatgcacaatgactat
ttctacactgacatcaaaggaacgccgttcagtgttggggtggccctgtccagaggtcat
gggaagtacttcttcagaggaaatgtctcagttgaagccgggctccgtgatctggaacag
ccagatgtcgccctggcagatgaatggacttactgcaacacagaggagcagcacgaacac
cgacacctgacccagattcaagccatcaagatgtttatgacgggccgcagaacacacctc
aaatgtgacagagagctgatccaggaagtgttgtttgatgctgtggtcaccgctccgctg
gaggcctactggactggactggccctcaacaagtcagagaactcagacaaaggagtggag
attgccttcctgggtacgcgcaccggcctctcgaggaccaacctgtttgtccccgccgat
cagctgtccaatcaagacttcctgacggcggaggaaaaggagggtgtgtttaacgccgat
cacttccctctgtggtacaagcgagcggcggagcaggtccccggggcgtttgtgtactcc
atccccttcagcacagcgttagaaaataaaagtgtggttttggccagcactgcaatccag
ctcctcgatgacagaaagtctccaatcgttgccgctgtagggatccagatgaagctcgag
ttctttcagaggaagttctggacagcctgcagacagtgtaccgctctggatggaaaatgt
ggcattagctgtgatagcgcggacattaactgctatctcattgacaacaatgccttcatt
ctcgtcacagaggagccctctcagacagggctcttcttcggagaggtggagggtgcagtt
atgaacaaacttctccaaatggggtccttcaaaaggatcacgctgtatgattaccaggcg
ctctgcagagagttcgctaggagcagcgacagtgcacgctctctatcaaatcccttcact
gtttttaagtggctcctggctgaacttgtcatttttctgctagaatttaacctgtacagc
tggtggaacgtggatctttctgtgaaagctcagagacctcgaggtaaaacccacatggtg
ccgtgtgacacagaataccctgcctttgtctccgaacgcaccatcaaagaaacaacaggc
aacatcgactgtgagggctgtgtcagatctttcgtcatacagcagattcccagcagcaac
ctcttcatggtggttgtggacaacaagtgtgactgcagcagttatcctccagttaccatg
gatcccatcgagatcatgtacaacgagtcactaaaatgtgacagactgaagtatcagaag
gacaggaagaagcctgaatcctgtcatcctttccaccctgaggaaaatgccatggagtgt
ggttcagcatcgcgcctctccagccctctagccgcagctctgctccctctgatagcatcg
accatcagcaggtga
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integrated database retrieval system
