Trematomus bernacchii (emerald rockcod): 117489905
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Entry
117489905 CDS
T09643
Symbol
asic1b
Name
(RefSeq) acid-sensing ion channel 1B isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117489905 (asic1b)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
117489905 (asic1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
117489905
NCBI-ProteinID:
XP_033995365
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All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MPVRIMCSISFSDDEPGRGYDKDGFDDHYRVKKSYGDSQEYLDGGSQADDYNEEEDEVGE
VDDLAAFFSGCTLHGPNHVFVEGKKFGIRQGLWGLVFTMALSAFLFQVVDRIIYFYQYDY
ITTLDENSAKNMTFPAITVCNYNFVRKSQMSYSDLIFMGPLLGFEEGMAPGFPLAPEPDR
PPGSRFSLDEFYNRTRHRIEDILLECTFRGIDCGPESFREIFTRYGKCYTFNSGQDGRPL
MVTMKGGMGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHTQDEPPFIDQLGFGVA
PGFQTFVSCQEQRLTYLPPPWGDCKASAMDSDFFNTYSITACRIDCETRYLVENCNCRMV
HMPGDAPYCTPEQYKDCADPALDFLVERDNDYCVCETPCNMTRFGKEMSFVKIPSKASAK
YLAKKFNKTEQYISDNLLVLDIYFEALNYETIEQKKAYELAGLLGDIGGQMGLFIGASLL
TILELFDYLYEVIKYKLCRCVKKKHKGRNNNDRGAVLSLDDVKHHAPCENLRTPSTYPGN
MLPHHPGQANFEDFTC
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccggtccgtatcatgtgctccatctccttttctgacgacgagccaggcagaggatat
gataaagacggctttgacgaccattacagggtgaagaagagttacggtgactcgcaggaa
tacctggacggtggtagtcaggcagacgattacaacgaggaggaggacgaggtaggggag
gtggacgacctggccgctttcttcagcggttgcacgctccatggccccaaccacgtgttt
gtggagggcaagaagttcggtattcgccagggtttgtggggtctggtcttcaccatggcc
ctgtctgctttcttgttccaggtagttgacaggatcatatacttctaccagtatgattac
atcaccacgctggatgagaactcggccaaaaacatgaccttcccagccatcaccgtgtgt
aactacaactttgtgcggaagtctcagatgagctacagcgacctgattttcatgggcccc
ctgttggggtttgaagaaggcatggcaccagggtttccactggccccggagccagaccgg
cccccggggtctcgcttcagcctcgacgagttctacaaccgtactcgacaccgcattgag
gacattctgctggagtgtaccttcagaggcatagattgtggccccgagagcttcagagag
atattcactcgctatgggaagtgctacacctttaattcaggccaagatggacgacccctc
atggtgacgatgaagggtgggatgggtaacggcctggaactgatgttggatatccagcag
gatgaatacttgcctgtatggggagagactgacgagacgtcgtttgaagcggggatcaag
gttcagatccacacacaggacgagcctccgtttatagaccagctgggcttcggagtggcg
ccgggctttcagacgtttgtgtcctgccaggaacaacggctgacgtacctgcctccacct
tggggggactgcaaggcctcggcgatggactcagacttcttcaacacttacagcatcaca
gcctgccggatcgactgcgagacacgatacctggtggagaactgcaactgcaggatggtc
cacatgcctggagatgccccgtactgcaccccggagcagtacaaggactgtgcagatcct
gccttggactttcttgtcgagagagacaatgactactgtgtgtgcgagacgccgtgcaac
atgacgcgcttcggtaaagagatgtcctttgtcaagatacccagcaaagcatcagcaaag
tacctcgccaagaaattcaacaagacagagcagtacatatctgataaccttctggtcctg
gatatctattttgaagcgctgaactacgaaaccatcgaacaaaagaaagcctacgaattg
gcaggccttctgggtgatatcggaggtcagatgggtctcttcatcggagccagcctcctc
actattctggaactctttgactatctatatgaggtgatcaaatacaagctgtgccgatgc
gtgaagaagaaacacaaaggccgcaacaacaacgaccggggagctgtgctgagcctggac
gatgtgaaacaccatgctccttgcgagaacctgcgtacaccatcaacatatcctggcaac
atgctaccccatcacccgggccaagcaaactttgaagacttcacttgctga
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