Trematomus bernacchii (emerald rockcod): 117489936
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Entry
117489936 CDS
T09643
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117489936 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117489936 (nelfcd)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
117489936 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
117489936
NCBI-ProteinID:
XP_033995415
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MDEEYYSGGGRDWEGTGEAPMEYVEGENDGKIQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
SGGSPEHVIALLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLMDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQE
EQGGSAIRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSSSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRIEGEHDPVAEFISHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatactacagcggaggcggccgagactgggagggcacgggggaggctccc
atggaatatgtggaaggggaaaatgatgggaaaatccaggaagattgcctgcagaaattc
tccagtagggattacatcatggagcctgccgtcttcaacacgctcaaaacatatttccag
tccggaggctctccagaacacgtcatcgcgcttctctctgaaaactactctgctgtggct
cagaccgtcaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtc
caagagcgagtagaaaatcacctcaagagtctcctgataaaacactttgacccccagaaa
gctgattctattttcactgtcgagggagagacccctgcttggctggagcagatgatagct
cacaccacgtggagagatctgttctataagctggcagaggctcacccagactgcctgatg
cttaacttcactgtcaagctcatctcagacgcaggctatcagggtgagatcaccagtgtg
tccacagcctgccagcagctggaggttttctcccgggtgttgaggacatctttggccacg
ctgatggacggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtt
tgtcacggcgagcacacctacctgttcgcccaggccatgatgtccatcctctctcaggag
gagcagggcgggtcagctattcgtaggatcggacaggaggtgcagaagtcggcacatgag
cgaggtcacgatgccagtcagataaccctcgcgctcggcacagcggcagcctaccctcgg
gcctgccaggcgctgggggccatgctctctaaaggagccctgaaccctgcagatatcacc
gttctgttcaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcct
gcctttctggacctgttcatgcagtcactgtttaagcccggatcaaagatcaaccaagac
cacaaacacaaatacatccacatcctggcctacgctgccagtgtggtggaaacgtggaaa
aagaacaagcgagtgaacatcaataaagatgagctgaagtcgtcttctaaagccatcgag
accgtgcacaacctgtgctgcaacgagaacaaaggagccacggagctggtggctgaactg
ggcacgctgtaccagtgcatccggtttccagtggttgctatgggggttttgaaatgggtg
gactggacggtgtccgagccgcggtacttccagctgcagacagaccacactccagtgcat
ttagccctactggacgagatctgcacgtgtcaccaactgctgcacccgcaggtcctccag
ctgctcatcaagctctttgagacggagcactctcagctggacgtcatggagcagctggag
ttgaagaagacgctgctggaccgaatggttcatctgctgagtcgtggctacgtgctgcct
gtagtgggttacatccgcaaatgtctggagaaactcaacacggacatctccctcattaga
tattttgtcactgaggtgctggatgtgatcgcgcctccctacacgtcagacttcgttcag
ctcttcctgcccatcctggagaacgacagcatcgcagggacaatccgcatcgagggggag
cacgaccccgtggcagagttcatatctcattgcaaatcaaacttcatcatgataaactga
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