KEGG   Trematomus bernacchii (emerald rockcod): 117489936
Entry
117489936         CDS       T09643                                 
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117489936 (nelfcd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tben03021]
    117489936 (nelfcd)
Transcription machinery [BR:tben03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     117489936 (nelfcd)
SSDB
Motif
Pfam: TH1 DUF4817
Other DBs
NCBI-GeneID: 117489936
NCBI-ProteinID: XP_033995415
LinkDB
Position
Unknown
AA seq 579 aa
MDEEYYSGGGRDWEGTGEAPMEYVEGENDGKIQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
SGGSPEHVIALLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLMDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQE
EQGGSAIRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSSSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRIEGEHDPVAEFISHCKSNFIMIN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaggaatactacagcggaggcggccgagactgggagggcacgggggaggctccc
atggaatatgtggaaggggaaaatgatgggaaaatccaggaagattgcctgcagaaattc
tccagtagggattacatcatggagcctgccgtcttcaacacgctcaaaacatatttccag
tccggaggctctccagaacacgtcatcgcgcttctctctgaaaactactctgctgtggct
cagaccgtcaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtc
caagagcgagtagaaaatcacctcaagagtctcctgataaaacactttgacccccagaaa
gctgattctattttcactgtcgagggagagacccctgcttggctggagcagatgatagct
cacaccacgtggagagatctgttctataagctggcagaggctcacccagactgcctgatg
cttaacttcactgtcaagctcatctcagacgcaggctatcagggtgagatcaccagtgtg
tccacagcctgccagcagctggaggttttctcccgggtgttgaggacatctttggccacg
ctgatggacggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtt
tgtcacggcgagcacacctacctgttcgcccaggccatgatgtccatcctctctcaggag
gagcagggcgggtcagctattcgtaggatcggacaggaggtgcagaagtcggcacatgag
cgaggtcacgatgccagtcagataaccctcgcgctcggcacagcggcagcctaccctcgg
gcctgccaggcgctgggggccatgctctctaaaggagccctgaaccctgcagatatcacc
gttctgttcaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcct
gcctttctggacctgttcatgcagtcactgtttaagcccggatcaaagatcaaccaagac
cacaaacacaaatacatccacatcctggcctacgctgccagtgtggtggaaacgtggaaa
aagaacaagcgagtgaacatcaataaagatgagctgaagtcgtcttctaaagccatcgag
accgtgcacaacctgtgctgcaacgagaacaaaggagccacggagctggtggctgaactg
ggcacgctgtaccagtgcatccggtttccagtggttgctatgggggttttgaaatgggtg
gactggacggtgtccgagccgcggtacttccagctgcagacagaccacactccagtgcat
ttagccctactggacgagatctgcacgtgtcaccaactgctgcacccgcaggtcctccag
ctgctcatcaagctctttgagacggagcactctcagctggacgtcatggagcagctggag
ttgaagaagacgctgctggaccgaatggttcatctgctgagtcgtggctacgtgctgcct
gtagtgggttacatccgcaaatgtctggagaaactcaacacggacatctccctcattaga
tattttgtcactgaggtgctggatgtgatcgcgcctccctacacgtcagacttcgttcag
ctcttcctgcccatcctggagaacgacagcatcgcagggacaatccgcatcgagggggag
cacgaccccgtggcagagttcatatctcattgcaaatcaaacttcatcatgataaactga

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