Trematomus bernacchii (emerald rockcod): 117489956
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Entry
117489956 CDS
T09643
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04260
Cardiac muscle contraction
tben04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117489956
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117489956
04261 Adrenergic signaling in cardiomyocytes
117489956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117489956
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117489956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
Cache_3-Cache_2
CENP-F_leu_zip
dCache_2
Motif
Other DBs
NCBI-GeneID:
117489956
NCBI-ProteinID:
XP_033995445
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MAIGKGSCSIVCLVSIQIILIFSASWPGAAGLTFPQQYTIMHWARRIEQEIDRVFQHITG
AQQLKGIYNEERRRFSLVKNQPRRIVEKVASDIEKLLAKKRKALVRLASEAERLQREHVW
QDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNDVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPASPWKTPDKID
LYDVRRGPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVENLLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDAVDQIQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSEAKQVQWTNVYQDALGLGMVVTGTLPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIYAIDPNGYLLLHPNLQPKLVNLL
EPVTLDFLDAEVEDVNKEEIRRQMIDGRPGEMQVKTLVKSIDEQYIDDVYRSYTWTPING
TDYSLGLVLPTYNEYFIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKRLHLSD
NNTQFLQNFLSLMLEISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNIAAELWDEDPEPFNSNYYKRSLDNKGYMFRAPSRSSLDDLVGGENGT
VGILVSSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDSRQGSQKCGPSRSCE
MDCEVNTDDLLCYLLDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIFNRRQSF
HFQSACEPVNDSQTGSATRGIFVPSIADILSLAWWTSTVAWSVTQQLLYGLAYNSWFYQD
DLLVDGFETRESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAET
LPCSSCEIERLTLIKTEFQEENPCEVLSNARYRKGPASCFDYNALENASECGRGHALQSS
IGVLLFIQLILPLLHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaagggtcttgcagcatcgtctgcttggtatctatccagattatcttg
attttcagcgcgtcgtggcctggagcagcgggtctcacattcccccagcaatacacgata
atgcactgggccaggcgtatcgagcaggagattgacagagtctttcagcacatcactgga
gctcagcagttgaaagggatatacaatgaagaaaggcgacggtttagtctggtgaagaat
cagcctcggaggattgtggagaaggtggcctcagatatagagaaactcctggctaagaag
cgcaaagcacttgttaggttagccagtgaagcagagcggctccagcgagagcatgtatgg
caggatggaatcaaggagctggacatggcttactatgactccaaggcagagctggattat
tactccatggatggagaaggagaggtggaaaacccctcgcacatcaagctggagtttgtc
tacgatccaaacttcaaaaacgatgtcaactattcctacacagctgttcagattcctaca
gatatttataaaggagctccagtcattctgaatgagctgaactggacgcaggcgctggag
aaggttttcatggagaacagtcaggaggatccgtcccttctgtggcaggcgtttggcagt
gcgacgggcgtcactcgctactacccagcttcaccttggaagacccccgataaaattgac
ctttatgacgtcaggagggggccctggtacatccagggagcctcgtcccccaaagatatg
gtcattcttgtggatgtgagcggcagtgtcagtggtctcaccctgaaactcatcaaagcg
tcagtggagaacttgctggacactttgtctgatgatgactatgtcaacgtggccaggttt
aacgagaaggccgaggccgtggttccctgcttcaaacatcttgtccaggctaacgtccgc
aacaaaaagatcttcaaagatgctgtggatcagatacaggctaaaggcaccactgactac
aagtctggatttcattttgctttcaaccagctgttaaataagactaatgtccctcgggcc
aactgcaataaaataatcatgctgtttactgatggaggcgaagacagggctcaggatgtg
ttcatgcagtacaactggcccaacaaaacggttcgagtattcaccttttcagtgggtcag
cacaactatgacgtcacacctttacagtggatcgcctgcaccaataagggttactatttt
gagatccgttccatctgtgctataaggattaacacccaggaatacctggacgtgctgggg
cgccccatggttctggcaggcagcgaagccaagcaggttcagtggaccaatgtgtatcag
gatgctttgggtcttggcatggtagtaactgggactttgcctgtgtttaatctcaccatg
gatggaaattcacaaaatcagctgattttaggtgtcatgggagtcgacgtgcatcttgac
gagataaagcgacttacaccacggtacaatcttggagccaatggatacatatatgccatc
gatcccaatggatatcttctccttcaccctaatcttcaaccaaagctggtgaacctcctg
gagcctgtgacgctggacttcctggatgcagaggtggaggacgttaataaagaggagatc
cggcgacaaatgattgatggaagaccaggcgaaatgcaggtcaaaacccttgtcaagtcg
attgatgagcagtacattgatgacgtctacaggagttacacctggactcccatcaacggc
acagattacagtcttggtctggtattacccacctacaatgagtacttcatccaggcagac
ctgagtgatgtgatgctgcagctccagtatatgcagtccctgctgcccagctcctttgaa
tcttcaggacatgtgtttcttgctccaagggaatactgcaaacgtctgcatctttctgac
aacaacacccagtttttgcagaacttcctctcgctcatgctggaaatttctccagaatct
gatgagtgtgaccaaggcctcatccataacctgattttggattccaggattatcgggcag
ctggcctctcgtgtttggaagaacaaggacctgaattcgtatggcttcctggctgtattt
gcgtccactgatggaggaataacacgtgtttttcccaatatagctgctgagttatgggat
gaggatcctgaaccattcaattcaaactactacaaacggagcctcgacaacaaaggctac
atgtttagagctccatcgagatcctcattggacgaccttgttggtggagaaaacggcacg
gttggaattcttgttagttcggctgtggaggttaatttaggaggcaaactgctcaaacct
tcagtggtcggggtgaagctggacttggaggcatgggtggacaagtttaagatcctggcc
agcaacgtgtcggacagtcgacagggctcacagaagtgtggaccatccagaagctgtgag
atggactgtgaagtgaacactgatgacctcctctgctatctcctcgatgatggtggattt
ctggttatgtccaatcagagagatcactggaaaaagattggccttttcttcggtgatgtg
gacccttacttgatgcacgctctctacaacaactccatcttcaatcgccgtcagtctttc
cacttccagtctgcatgtgaaccggtcaacgacagccaaacgggttcagcaacgaggggc
atctttgtgccgtccattgctgacatcctcagcttggcctggtggacgtccacagtggca
tggtctgtgacccagcagctcctgtatggactggcatacaacagctggttctaccaagat
gatcttctggttgatggttttgagacaagggaaagcagctgtgtgaccatccaaagccag
ttctactttacaaacaccactaactcctacaacgtgctgcaggactgcgggaactgctcc
cggctgttccacgcgaagcggatagaaaacaccaacctcctctttgtggtcgcggagacg
ctcccctgcagctcatgtgagatagagagactgacactgatcaagacagagtttcaggag
gagaatccatgcgaagtactgagcaacgcgcgatatcgtaaaggcccagcatcatgcttt
gactacaatgccttagaaaacgcgtcagagtgtggacggggtcatgcactgcagtcttca
ataggagtccttctctttatccagcttattctgcctcttcttcatctctga
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