Trematomus bernacchii (emerald rockcod): 117489960
Help
Entry
117489960 CDS
T09643
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117489960 (ccdc174)
03041 Spliceosome [BR:
tben03041
]
117489960 (ccdc174)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117489960 (ccdc174)
Spliceosome [BR:
tben03041
]
Complex C
Other components
EJC/TREX
117489960 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
117489960
NCBI-ProteinID:
XP_033995450
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MDKKKKPFNVTASSLVDLKAELYRKQEQFKQDKLGHDNTGAGFTSRAKVKKPNVWIKQNT
GVSARAEKDAEQLSEEQSSLDTSKRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKII
DKKRETLAQKREDEERGNRSPVPPPENPNEEWVDYEDALGRSRRCMKKDLPGFEKLDQNL
YGKAKASAEKTLLSEDMRRELQRQEWEMEEEEAMKRPVGPIHYEDIRGQEARDLGVGYFA
FAHDAEQRRKQRETLDMLRDQTTEQRTKREQLKDKRQAILKARLSKVRSRKTKKAKLDGT
EDDDNEGGDDEGDLIGPPAPPEEVPEVSRARKVEVEIQERKDSKPGVPHVREWDRGKESM
FNEWTSRRRDERESEFAPPTAYFSEWKRERSVKVKTQESKSKMSFKWSKGPEEVSESKEQ
PLSPPKTAPSPPAPQPPPPTPPQPPPQPPPPQPQTPSQASPSGLPAESAPVSAPPFNPQF
PPHYAQFPRPPPPQFAGQPHMYPPQYPNQYYNQYPPQYPPQYLPQYAPQYPPQYPTHYAP
QYAPQFPSQVPPQFPSQVPPQFPSQVPPQVPPEVPPQVPPQVPPQVPPQQQSQSQPEQPE
QSMDEMLSFYRSIT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaacccttcaacgtgacggcttcatctctggtggaccttaaagct
gaactgtacaggaagcaggaacaattcaaacaggacaaacttgggcatgacaacactgga
gctgggttcacatcaagagccaaagtcaagaaacctaatgtctggatcaaacaaaacact
ggagtctcagcaagagctgagaaagatgcggagcagctgtctgaggagcagagcagtctg
gatacctcaaaacgcaagctagaggagaaggccaaactctacgagcaaatgacaaaagga
gactttccagatgaagagacagaaggactgttcctggtggatttcacccagaagattatt
gacaaaaagagagaaacgcttgcacagaaaagagaggatgaggaaagaggaaataggtct
cctgtccctcctcctgaaaatccaaatgaggaatgggtggattatgaggatgctttgggc
cgatctcggagatgcatgaagaaagacctgcctgggtttgagaaattggaccaaaacctt
tacggaaaagcaaaagcctctgctgagaagaccttactctcggaggacatgcgcagagag
ttgcagaggcaggagtgggagatggaggaagaggaggccatgaagaggcctgtcggaccc
atccactacgaggatatcaggggacaagaggctcgagatctcggtgtgggttactttgcg
ttcgctcatgatgccgagcagcgcaggaagcagagagaaactctggacatgctcagagac
cagacaaccgagcagcgcactaagagggaacagctgaaggacaagaggcaggccatcctg
aaggctcgattgtctaaagtgaggagtaggaagacgaagaaggccaagctggatggcacg
gaggacgacgacaatgaaggaggggacgacgaaggggacttgataggacccccggctcca
ccagaggaggtaccagaggtcagcagagcgaggaaggtggaagttgagatccaggaaagg
aaggactccaaaccaggagttcctcatgtcagggaatgggacaggggcaaagagtccatg
tttaatgagtggacatcacggcgtcgcgatgagcgagagtcagagttcgcccctcccact
gcgtacttttctgagtggaagagagagcgatcggtgaaggttaaaactcaagagagtaaa
tccaagatgtccttcaagtggagcaagggcccagaagaggtctctgagagcaaagagcag
ccactttctccgccaaaaactgccccctcacctcctgcccctcaaccacctcctccaact
cctccacaaccacctccacaaccacctcctccacaaccacagactccatcccaggcttca
ccttcaggtctcccagcagagtccgctccggtgtctgctcctccctttaatccccagttt
ccccctcattatgctcagtttcctcgtccacctcctcctcagtttgctggacagcctcac
atgtatcccccccagtacccaaaccagtattacaaccaatatccgccccaatatcctcca
caatatctgccacaatatgctccacaatatcctccccaatatccaacacattatgctccc
caatatgctcctcagtttccttcccaggttcctcctcagtttccttcccaggttcctcct
cagtttccttcccaggttcctcctcaggttcctccggaggttcctcctcaggttccccct
caggttcctccccaggttcctcctcagcagcagagccagtctcagcctgagcagcctgaa
cagagtatggatgaaatgctgtccttctacaggagcattacctga
DBGET
integrated database retrieval system
