Trematomus bernacchii (emerald rockcod): 117489973 Help Entry 117489973         CDS       T09643                                  Name (RefSeq) rootletin-like   KO K16469   rootletin Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tben03037]     117489973 Cilium and associated proteins [BR:tben03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    117489973 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rootletin Crescentin OEP Motif Other DBs NCBI-GeneID:  117489973 NCBI-ProteinID:  XP_033995469 LinkDB All DBs Position Unknown AA seq 2017 aa AA seqDB search MSAAENADTDSNKLESVIQRLEESVLSEEKKLTVRGPSPDGPPTCLPARVREIVTKNLNE NSAMSSVMSLQEENRVLQGELGRLEDLLAHSRADRDELAIKYGAISERLEQALRFETGDN NHDSPDSRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKRC GDLEQMVQERSSELEKHRSHSESSNGLHQDDSSSNLEDALIRLEEEQQRSSSLSAVNAML REQLEQAGLANEALSHDIRRLTADWTKAREELDQKESDWRREEESFHSYFSTEHSRLLTL WRQVVGFRRHVCELKSATERDLSDMRNEMSRASHSAQVSCAGLSSTLNTREGGAALNLER EKALRVQLEQQLRERVSEMMNLQTRTDTERSELNIRLSESVREAERLKGQIEERDREIVV HMRRLEEQSGNDETDMQVMRAHTATLTDTLRDIAQTVLSDGESSSEADQDNSGAPLLALV RGFSPHRSSSPRRSSSPSRPSSLAPLSEAGLSALCSAVANKTLQLQDVRGRLLSAQSSVH QLRKQLSETDLAKKDAEQRNQALQRERDAAQRERETTQREKERLKQERDTLASEKVSLEK TVQTAQSSNQILQMECEKLQLSEASTQRERDHEREEKEAATQERERAKAETQRIQKQLDQ SESRASAQRGKLSAVSESQQQVEVERQLLQQEKAQLSEALARAEGSNAELSLLINKLQSE DAALRDSLAKMGSMNEGLAQDKTDLNRYILKLEEEKALLQAQKREAEQEKLTIRDELVRL EQDRMELDSARIMLHQSLQEAELSRGGMEAELQTLRTERFKLQEKVTQLCGEVTSLGSEL SLARGEGERNEVALEEVGRGRAELTRDKAALVVQLTASERENTVLSEELAAFRSERESLE TSLFEVQQQLLQVESRREQLETENQNLRVRCETAAADLKRVRSDGENMSAQAEREKQALK QTLHAAQLEAQQALRKAISEHQEETERLVSEKEVVRQSLLKEQEGALRRLRQETEEQLHR AEREREELQGELRSLQHDRDQSLLQAESEKQQALSLKEAEKSVLSERASSLQAELSVAGL EVERMSREASLSNEQEQIRVGALTSELLEIRSQLEDAASVHERELQSLRETCADLQSRTD VAFKELDQCRASLAANQESRDQLRRDLLDSERRFNQTQDAAEIIRRDGTEFRRSLTDVTK ERDTLGQSNTHLREALRSAETERISVKRQCEEKEQRVAVLEGNLSSTQKEVTELRSCLRE VERSRLEARRELQELRRQLKVLDAEKEERGREVAELQTRLSLEEQREEERGKDVFIHKQK LTEAETARDSLKKELSLTHKRLLEFESGWRGCERELTAQLQEARGCEKKLQDEAKNLALR AAAAQDSAAQSSLQLSEAQGRLAGTEAELTRAEASRRDLEYRLSSLQSALTRTLGIGAGG RGGRGRSPGGGATSPGTMSRHHSISPLRSSLTPPKEFRGSTPDNTLSSVSPERGNTPLPG PQHELDPDTLRSDLRDFLLELREAQRERDDAQCQLGAVQRELEELRLERDSALGRLTHLQ NTCQEHQEGKRGLDERLTTTQILLQQQEEAVRRGDRERRALSDRVKDLERALQASEQDKK HTQDQLNKQRAAEMRLEAERRRLREALEAAEARATRVELARRGLEGELQRLKLSVGDREA DSQAALQHHEALLKQVAEGEARVSLLQREVERLSQALLKAQEGESLFKEMTSSLKKTLQE ASSSHSSTQSRLNALQKTLSVAEQDKRLLQERMDEARAALSEGKRNVVILTERVQSLQSE LEQSKLRREEAEAELNNTQKALCQRSVGVAEAQRGAQSAQTERAAVEERLRGLQRAVAML ETEKKDAERQAVRLEKDKDALRNTLDKVERQKLKTEEGSMRLSAEKSRLDRSLNTTEQEL QDAQQQILMLQTQLAETEQSQNLCESFARQRDEAQREAERLRTSFRDVERTLGTRERAHR HRVKGLEEQVSTLKEQLQQEMKRRQTSLPPSLLSAGK NT seq 6054 nt NT seq  +upstreamnt  +downstreamnt atgagcgctgcggaaaacgcagacaccgactccaacaaactggagtctgtgatacagagg ctggaggagagtgtgttgtctgaggagaagaagctgacggtccggggcccttcaccagac ggcccccccacatgtctgccagcaagagtacgagagattgtcacaaagaacctcaacgag aactcagccatgtcctccgtcatgtcgctgcaggaggagaaccgggtgctgcagggcgag ctgggccggctggaggacctgctggctcacagccgagccgaccgggacgagctcgccatc aagtacggtgcaatcagtgagaggctggagcaggcgctgcgtttcgagacaggagacaac aaccacgattcgccggactctcgcagcctggcgcagcagaatgtggacttgcggcggcgg ctggacgaggagcaggcggcctacaagcgtaaactcactgcgtaccaggagggtcagcag aggcaggcacagctcgtgcagaagttgcaggccaaggtactgcagtacaaaaagagatgt ggggatctagagcagatggtgcaggagcgctcatcagagttggagaaacacaggagccac agtgaatcctcaaatggtctgcatcaagatgactcaagcagcaacctggaggatgcttta atccgtctggaggaagaacagcagaggagcagcagtttgtctgcggtgaatgccatgctg agagagcagctggagcaggccgggttggccaacgaggctctcagccacgacatccgcagg cttactgctgattggacgaaagccagggaggaactggaccagaaggagtctgactggagg agggaagaagagtctttccacagttatttcagtactgagcacagtcgactgctgacgctg tggaggcaagtggtcgggtttcggaggcatgtctgtgaactgaagagcgccacagaaagg gacttgtcagacatgcgtaacgagatgtctcgggcgtcccactctgctcaggtgtcttgt gcaggtctgtcttccaccctgaacacacgggaggggggagcagcgctgaacctggagaga gagaaagctctgcgggttcagctggagcagcagctgagagaacgagtgtccgagatgatg aatctccagaccaggacagacacagagaggagtgagctcaacatcaggttatcagagtca gtgcgagaggcggagagactaaagggacaaattgaagagagagacagagaaattgttgta catatgaggaggcttgaggaacagagtggtaacgatgagactgacatgcaggtgatgaga gctcacactgcgacgctaacagacaccctgcgagacatcgctcagacggtgttgtctgat ggagagtcgtcatcagaggcggaccaggacaactctggagctccactgctagcgttggtg cggggcttctccccccaccgctcctcctctccccgcaggtcgtcctccccctctcgaccc tcctctctggctcccctttctgaggcggggctgtcagctctgtgctctgcagtcgcaaac aagacactccagctgcaggatgttcgagggcgtctgctctctgctcagtcttcggttcat cagttgcgcaagcagctttcggagactgatctggcaaaaaaagatgccgaacagcgcaac caagctctgcagagagagagggatgctgctcagagagagagggagaccacacagagagag aaggagcgtctgaagcaggagagggacacgctggccagtgagaaggtgagcctggagaag acagtgcagacggcacagagcagcaaccagatcctgcagatggagtgtgagaagctccag ctgagcgaggcgtccacacagcgagagagagatcatgagagggaggagaaggaggccgcc acgcaggagagagagcgggccaaggccgagactcagaggatacaaaagcagttggatcag agtgagagtcgggcctccgctcagcgtgggaagctgtctgcagtgagcgagtctcaacag caggtggaggttgagcggcagctgctgcagcaagagaaagcccaactgtctgaagcactg gctcgggctgagggcagtaacgcagagctctccctgctgataaacaagctgcagtctgag gacgcagctctcagagactctctggccaagatgggaagcatgaacgagggactggcccag gacaaaactgacttaaacagatacattctcaagctggaggaagagaaggctctcctgcag gctcagaaacgggaggcggagcaggagaagttgaccatcagagatgagctggtccggttg gagcaggaccggatggagctggactccgcccgcatcatgctgcatcaatcactacaggag gcagagctgagccggggggggatggaggcagagctccagactctcaggactgagagattt aagctgcaggagaaagttacccagctttgtggcgaggtgacctctctgggatcagagctg agtctggccagaggcgagggcgagaggaacgaggtggctttagaggaggtgggccgcggg cgggcagaactgacccgagacaaagctgcactggtggtccagctgacggcgtccgagaga gaaaacacggtgctgtcagaggagctggctgctttcaggtcggagcgcgagtccctggaa accagcctgttcgaggtgcagcagcagctccttcaggtggagtctcgcagagagcagctg gagacagagaaccaaaaccttcgagttcgctgtgagaccgcagcagctgacctgaagcgt gtgcgctccgatggggagaatatgtcagctcaggctgagcgggagaaacaggctctgaag cagaccctacatgctgcacagctggaggcccagcaggctttacgcaaggccatctctgaa caccaggaggagacggagagactggtctcagaaaaggaagtggtgcggcagagcctgctg aaggagcaggagggcgctctgaggaggctcagacaggagacggaggagcagctccacaga gcagagagagaaagagaggagctgcagggagagctgaggagtctgcagcacgaccgagat cagagcctgctgcaggcagagagcgagaaacagcaggccctttctctgaaggaggcagag aaaagtgtgttgtctgagagggcgtcctccctgcaggcggagctgtcagtggcaggcctg gaggtcgagcggatgtcaagagaagcctctctttccaacgagcaggagcagattagagtc ggggctctcaccagcgagctgctggagattcgctctcagctggaagatgcagcttctgtt catgaaagggaactccagagtctgagggagacttgtgctgaccttcagtctcgcactgat gtggctttcaaagagctggaccagtgcagagcttctctcgcagctaaccaggagagtcga gaccagctgaggcgggacctgttggacagcgagcggcgtttcaaccaaactcaggacgct gcagagatcatcagaagagacgggacggagttccggcgcagcctcactgacgtcaccaag gagagagacacactcggccagtccaacactcatctgagagaagctctacgaagtgcagaa acagagaggatcagtgtgaaacgccagtgtgaggagaaggagcagagggtggctgtgctg gagggaaacctgtcctccactcagaaggaggtgacggagctgcgcagctgcctgagagaa gtcgaaaggtcacgacttgaagctcggcgagaactccaggagctccgcagacagctgaag gttctggatgcagagaaggaggagagagggagggaggtggccgagctgcagactcgcctg tccctggaggagcaaagagaggaggagagagggaaagacgtttttatccacaaacagaag ttaactgaagctgaaacagctcgagactccctcaagaaagagctctccttgactcataag cgcctgctggagtttgagtcaggctggcgaggctgtgagagagagctgacggctcagctg caggaggcgcgaggctgcgagaagaagctgcaggatgaagccaagaacctggccctgcgc gctgcggcggctcaggactctgcggctcagagcagcctgcagctgagcgaggctcagggc cggctggccggcaccgaggccgagctgacccgggccgaggcctccaggagggacttggag tatcgtctgagcagccttcagtcggcgctgacgcggacgctgggcatcggggccgggggc agggggggccgggggaggagcccgggggggggcgccacatcaccaggcactatgtcgcgc caccacagcatctcacctctcaggtcctcactgacgcctcccaaagaatttcgaggaagc actcctgacaataccttgagctcagtgtctccggagagagggaacacaccgctgcctggt cctcagcatgagctggaccccgacacactgcgaagtgatttgagggacttcctgctggaa ctgcgtgaggctcagagagagagggatgacgctcagtgccagctgggggccgtgcagcgg gagctggaggagctgaggctggaacgagactctgctctgggtcgtctcactcacctgcaa aacacctgtcaggaacaccaagaagggaagcgtggactggacgagcgcctgaccaccact cagattttgctgcagcagcaggaggaggcggtgaggagaggggacagagagaggagagct ctcagcgacagagtgaaggatttagagcgagcgctgcaggcctctgagcaggataaaaaa catacacaggatcagttgaataagcagcgtgcggctgagatgcgtctggaggcagagagg aggcgtctgcgggaagcgctggaggcagccgaggcccgagccaccagggtggagctggcg aggcgaggcctggagggggagctgcagagactcaaactgagtgtgggggaccgggaggcg gacagccaggccgccctgcagcaccatgaggctctcctgaaacaggtggcagaaggagaa gcccgtgtgtctctgctgcagagagaggtggagaggctgagccaggctctgctcaaagct caggaaggagagtctttattcaaagagatgacctcttccctcaaaaagaccctccaggag gcttcatcttctcacagcagcacacagagtcgcctgaacgctctgcagaagacgctgagc gtggctgagcaggacaaaaggcttctacaggagcggatggatgaagcccgggcggcacta tcggaggggaaaaggaacgtggtcatcctcactgagcgtgtgcaaagtttgcagagtgag ctggaacagagcaagctgagacgagaagaagcggaggccgagctcaacaacactcaaaag gctctttgtcagcgctctgtcggtgtggcagaggctcagcgcggcgcccagtcggctcag acagagcgggccgctgtggaggagcggctgcgtgggctgcagcgagccgtggccatgctc gagacagagaaaaaagatgcagagagacaagctgtgaggctggagaaagacaaggacgca ctgaggaatacactggataaggttgagcgtcagaagctgaagactgaggaaggcagtatg cggctctctgcggagaaaagccgcttggaccgctctctgaacaccactgagcaggagctg caggacgcacagcaacagatcctgatgctgcagactcagctggctgagacggagcagtca cagaatctgtgtgagagttttgcgaggcagcgggacgaggcccagcgggaggcggagaga ctcaggacgagcttcagggacgtggagcgcacgctgggcaccagagagcgagctcaccga cacagagtgaagggcctggaggagcaggtgtccaccttaaaggagcagctgcagcaggag atgaaacggcgacaaacttctcttcctccctccttattgtcggcaggaaagtga

DBGET integrated database retrieval system