Trematomus bernacchii (emerald rockcod): 117489980
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Entry
117489980 CDS
T09643
Symbol
usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117489980 (usp49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117489980 (usp49)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117489980 (usp49)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117489980 (usp49)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117489980 (usp49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
PRY
Motif
Other DBs
NCBI-GeneID:
117489980
NCBI-ProteinID:
XP_033995479
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MDRCKHVGRLRLGHDHSVLNPQKWQCVDCSTTDSVWACLKCSHVACGRFMEEHSLKHFQE
SHHPLVMEVRELDVFCFACGDYVLNDNAEGDLKLLRGALSTVRSPGRRSLRSATVGVCTP
WVGDTGPKPAMQLASRHRRKALLGKMLRTWIGKHQELQNEREEKLEEARRQKKEVKRRLM
EELGGVPPRKSARLLTQAPRSANTLIPRKFREPPERLPPASKKPSLLTLSRKTPQNGKAA
KLRRYYSSHTVTRRRPAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEEL
LAKTNQAQGMTAVTGVVSSGTASLPGSPLGRVGKAGSWNLPVGKKESAPPTPQASELVQP
KEPRCSTRQQMSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEFL
CELLDKVQQELDTEGSKRRIVIPITKRKLSKQVLKVLNTIFHGQLLSQVTCLSCKHKSNT
VEPFWDLSLEFPERYHSIDKSSGSTAYQRSCTLIEMLSKFTEMEALEGSIYACNHCNKRR
RKTSHKPLVLSEARKQLLIYRLPQVLRLHLKRFRWSGRNHREKIGVHVAFDQVLNIKPYC
CTGSGHPVHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVEE
VCNTQAYILFYTQRSA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttgtaagcacgtggggcgccttcgcctgggccacgaccattctgtcctcaac
ccacagaaatggcagtgtgtggactgcagcaccaccgattcagtgtgggcctgcctcaag
tgctcccacgtggcctgtggacgcttcatggaggagcactcgctcaaacactttcaggag
tcacaccacccactggttatggaggtgcgtgagctagatgtgttctgttttgcctgtgga
gactatgtactcaatgacaacgcagagggagacctcaaactcctcagaggggcgctctcc
acagtgcgcagcccagggagacgctcactacgctcagcgaccgtgggggtttgcaccccc
tgggttggagacactgggccaaagcccgccatgcagctggcctctcgtcacaggaggaaa
gcacttctagggaagatgcttcggacatggatcggtaaacaccaggagctgcagaatgag
cgggaagagaaacttgaggaagctagaagacaaaaaaaagaggttaaaaggagactcatg
gaagagcttggcggtgtccctcctagaaagagtgctaggcttcttactcaggcaccacgt
tcagccaacacactcattcctcgcaaatttcgcgaacctccagaacgcctacctcctgct
tccaagaagccttcccttcttaccctgtcccgtaagactcctcagaatggcaaagctgct
aaactgaggaggtactactcctctcacacagtcacccgccggagacctgctccaggtgtc
actggtctgcgcaatctggggaacacatgctacatgaactcaatattgcaagtgctgagc
cacctgcagaaattcagggagtgttttctcactttggacctgtgtgagactgaggagctg
ctggccaagaccaaccaggcccagggcatgactgccgtgacgggtgtagtcagcagtggg
accgcatcgctgcctgggagccctctgggacgcgtaggtaaagccggcagttggaattta
cccgtgggcaaaaaagaaagtgctcctcctaccccgcaggcttcagagttggttcagcct
aaggagcctcgctgctccacccgccagcagatgtctctgtgccatgagttacacacactt
ttcagggtcatgtggtcaggccggtggtccttagtgtctccattcgccatgctgcactcg
gtgtggaacctcatcccagctttccggggctacgaccagcaggacgcccaggagttcctg
tgcgagctgctggacaaggtgcagcaggagctggacacagagggctccaaacgcaggata
gtgatccccatcacaaagaggaaactatccaagcaagtgctaaaggttcttaacaccatc
ttccatgggcagctactcagccaggtgacgtgtctgtcctgtaagcacaagtctaacaca
gtggagccattttgggatttgtctttggagtttccagagcgataccacagcatagacaaa
agctcaggctctacagcttaccagcgcagctgcaccctcattgagatgttgtccaagttt
accgagatggaggctctcgaaggcagcatctatgcctgcaaccactgcaacaaaagaaga
cggaaaacatcccacaaacccttagttctgtcagaggctcgtaagcagcttctgatctac
cgtttacctcaggttctacggctgcacctcaaacgcttcagatggtcggggagaaaccat
agggagaaaatcggcgtccatgtggccttcgaccaggttctgaacatcaaaccgtactgc
tgcacaggctcaggtcaccccgtccacagaggaggctacacctacgatctgtctgctgtt
gttatgcaccatgggaaaggctttggctcagggcactacaccgcatactgctacaacaca
gaaggaggtttctgggtccactgtaatgactctgagatgaaggtgtgcagtgtggaggag
gtgtgcaacactcaggcctatattctcttctatacccagaggtctgcctag
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