Trematomus bernacchii (emerald rockcod): 117489984
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Entry
117489984 CDS
T09643
Symbol
fbxo42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117489984 (fbxo42)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117489984 (fbxo42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
117489984
NCBI-ProteinID:
XP_033995485
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MSRSPDNEDGCFVAMDTEDDGADPAGVTEEEEANMGSCRQEGNMDNCAKRGGRTMVELPE
EVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLKAVQEGNIQWESRTYPYP
GTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPS
PKAGATLVMHKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPM
AGHSSSVIGNTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPPISGPLPHPRGGQSQIVID
DQTLLILGGCGGPNALLKDAWLLHMDSPPWRWQQLQVENEEHGAPELWCHPACRVGQCVV
VFSQAPSGRAPLSPSLNSRPSPISASPGPLGSEPPSLRSQSPVRSGAAGVVLGAVEEAPC
VNGRWGTLRPRPSARGAREGSPSSPQQPSPSQGPDSPPLPAVPPLLNGSSPSPKTSPAQA
ASPSSRPLLNASTDYGWESPLAAAQHPEVPSTNGLHTPPAGSPHTPPGAVSPAALRRGLE
AVKNKSSSSLPSSSSSSSLQTQGASPGGGSGGGAGPPGTPPSSSSSPPQAAGADGHAIPP
IARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKSARVVSWRVYGNGTPAAVTGP
PETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcccctgataatgaggatggatgctttgttgccatggatacagaagacgat
ggtgcagatcctgccggggtaacagaggaggaagaggcaaacatggggtcctgccgacaa
gaagggaacatggacaattgtgccaaacgaggggggagaaccatggttgagttgccagag
gaagttcttgaatatattctgtccttcctctcaccttaccaggagcacaagaccgctgct
cttgtatgtaagcagtggtatcgtctcattaaaggtgttgcttatcaatgctaccacggt
ttcttgaaagctgtccaggaggggaatatccagtgggaaagtcgcacatacccatatcca
ggaaccccaataactcagcgcttctcacacagtgcatgttattacgactcaaaccagtcc
atgtatgtgtttgggggttgcactcagagtagctgcaatgctgccttcaatgatctgtgg
agacttgacctcaacagcaaggagtggatccgccctttagcctcaggctcttatccatct
cctaaagctggggcgactctagtgatgcacaaagatctgttagtgctgtttgggggatgg
acgcggccgagcccatatccactgcaccaaccagaaaggttttttgatgagatccacacc
tactctccttcaaaaaactggtggaactgtatagtaacaacacatggacctccaccgatg
gctggtcattcttcatctgtgattggaaacaccatggtggtttttggtggatcactagga
gctaggcaaatgagtaatgaagtctgggttctggatctggagcaatggtcctggtccaaa
ccccccatatctggccccttaccccacccgcgaggaggccaatcacaaattgtgattgat
gatcagacgctgctcatcttgggaggctgtggcggtcctaatgcactccttaaagatgcc
tggctccttcacatggattcaccaccatggaggtggcagcagctgcaggtggagaacgag
gagcacggggccccagagctgtggtgtcacccagcttgtagagtgggccagtgtgttgtg
gtgttctcacaagctccatctggccgtgcacctctcagcccaagtcttaactctcggccc
tccccgataagtgcctcaccgggccctctgggctccgaaccgccttccctgcgctctcag
tctcctgttcggagcggagcggccggcgttgtcctgggagcagttgaagaggctccttgt
gtaaatggccgatggggcacgctgagacctcggccatcagcgagaggggccagagaaggg
agcccctcctccccccagcagccgtctccttcacaaggcccagacagccctcctcttcct
gcagttcccccgttattaaacggatcctccccttcaccaaagaccagcccggcccaggct
gcctctccttcctcacggcccctcctaaatgcctccacagactatggctgggagtctcct
cttgctgccgctcagcaccctgaggtgcccagtaccaacggcctgcatacccctcctgcc
ggctccccacacactcccccaggagcagtgtcccccgctgccttacgacgaggtctggag
gcagtgaaaaacaaatcttcctcatctttaccgtcttcatcgtcatcgtcttcccttcag
acacagggggcttctcctggaggaggaagcggtggaggagccggtccacctggaacccct
ccgtcttcctcctccagccctccgcaggctgctggagctgatggacacgctatcccacct
attgcacggcgtctgggccatcacccaccccaaagcctgaacgtagggaaacctctatac
cagtctctcaactgcaagcccatgcagatgtacgtgttggatgtttccagggccaagtct
gcgcgggtggtgtcctggagagtttacgggaacgggacccccgccgcggtaacagggcct
ccggagaccagcctccacacagtggtacagggaagaggagagctcatcatttttggtggc
ctcatggacaagaaacagaatgtgaagtactaccctaaaactaacgccttgtactttgta
cgcgctaagaggtaa
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