Trematomus bernacchii (emerald rockcod): 117490055
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Entry
117490055 CDS
T09643
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117490055
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117490055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
WHD_NOD2
PRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
117490055
NCBI-ProteinID:
XP_033995537
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
METTDPKIHHEGPDSPGPGPSCVSMKSGNSTPRFITFKEGEHDDSPEIHHERPDPPGPSC
VSMKSDWSMPRPIGFKDGEHSDGPRVHQQRSEGPGGPSAQQHQTHLDSILMLLEENIVTF
VKNELKKIQKALSSDYPECLESQSEDEEVLDGEDEEQRWSSREAFLNITLHFLRSMKQEE
LAERLQSRTAAAVCRRKLKSTLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGAAEVN
DEHEVRQIETASRKPDRPETTIRQEDLFKASPGRDAPIRAVMTKGVAGIGKTVLTQKFTL
DWAEGKANQDIQFTFPFTFRELNVVRENKYSLVELVHHFFSETRDAGICRFDQFPVVFIF
DGLDECRLPLDFHNTEILTDITESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPLE
CVDMVTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISATVL
EEVLKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPPWSPESRKMMESLGKLA
FEQLQKGNLIFYESDLTECGIDITAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEFL
AALHVHLSFINSGVNLLSEEPATSWLFKVFRDKPTLTHLYQSAVDQALQSPNGHLDLFLR
FLLGLSLETNQKLLQGLLTQTKGRPDTNHQTVQYIKKKMDEDLSPERSINLFHCLNELND
YSLVEQIQQSLSSGSLSTDSLSPAQWSALVFILLSSGEDLDVFDLNKYSASEEALLRLLP
VVKASRKAVLSGCKLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKNLCAGLKSPP
CSLETIRLSVCNLSERSCEALSSVLSSQSSRLRDLDLSNNDLKDSGVKNLCAGLESLPCE
LETLSLSGCLVTNKGCASLASARSSNPSHLRELDLSYNHPGDSGMMLLSVLQKDPLCRLH
TLRFDHCGEQRLKPDVRKYSCELTLDTNTVQRYLKLSDSNREVTCVEEEQEYPDHPERFD
FWEQLMCREALTDRCSWEVEWKGRVSISVTYRGISRRGDSEESLLGWNDQSWSLICSDKG
YSVWHNSKDAGAHNPSSSSSSSSSSSSSFSFSFFSSFFSSASAASSEETTSSPVVMSLVS
GDMDIT
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccactgatccaaagatccaccatgagggaccagactctcctggacctggaccc
agctgtgtgtccatgaagagtggaaactctacgcctcgatttattacgtttaaagaggga
gagcatgatgatagtccagagatccaccatgagagaccagaccctcctggacccagctgt
gtgtccatgaagagtgactggtctatgcctcgacctattgggtttaaagatggagagcat
agtgatggaccaagagttcatcagcagagatcagagggtcctggtggtccgtctgcccag
cagcatcaaactcacctggactccatattgatgctgctcgaggagaacattgttactttt
gtgaagaacgagctgaagaagatccagaaggctctgagttcagattacccagaatgctta
gagagtcagagtgaggatgaggaggtgttggacggtgaggatgaagagcagaggtggagc
agcagagaggcatttctgaacatcacactgcacttcctgaggagcatgaagcaggaggag
ctggctgagcgtctgcagagcagaactgctgctgcagtctgcagacgtaaactcaaatcc
accctgaaggagaggttccagtgtgtgtttgagggcattgctaaagcaggaaacccaacc
cttctgaaccagatctacacagagctctacatcacagaggggggggctgcagaggtcaat
gatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaaca
accatcagacaagaagacctctttaaagcctcacctggaagagatgcaccaatcagagca
gtgatgacaaagggcgtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaaggcaaagccaaccaggacatccagttcacatttccattcaccttcaga
gagctgaatgtggtgagagagaacaagtacagcttggtggaacttgttcatcacttcttc
tctgaaaccagagacgcaggaatctgcaggtttgatcagttcccggttgtgttcatcttt
gacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgat
atcacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaagctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcttgag
tgtgtggacatggtgacagaggtccgagggttcactgacccacagaaggaggagtacttc
aggaagagattcagagatcaggagcaggccggcaccatcatctcccacatcaagacctca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatctctgctacagttctg
gaggaggtgttgaaaaccagagagggaggagagctgcccaagaccctgactgagatgtac
atccacttcctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagctgag
acagatccaccctggagtccagagagcaggaagatgatggagtctctgggaaagctggct
tttgagcagctgcagaaaggcaacctgatcttctatgagtccgacctgacagagtgtggc
atcgatatcacagcagcctcagtgtactcaggagtgttcacacaggtctttagagaggag
agaggactgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggagtttctg
gctgctcttcatgtccatctgagcttcatcaactctggagtcaacctgctgtcagaagaa
ccagcaacctcctggctgtttaaagtctttagagacaaacctacactaacacatctctac
cagagtgctgtggaccaggccttacagagtccaaacggacacctggacttgttcctccgc
ttcctcctgggtctttcactggagaccaatcagaaactcctacaaggccttttgacacag
acaaaaggtcgtccagacaccaatcaccaaacagtccagtacatcaagaagaagatggat
gaagatctgtctccagagagaagcatcaacctgttccactgtctgaatgaactgaatgat
tattctctagtggagcagatccaacagtccttgagttcaggaagtctctccacagatagt
ctctctcctgctcagtggtcagctctggttttcatcttactgtcatcaggagaagatctg
gacgtgtttgacctgaataaatactctgcttcagaggaggctcttctgaggctgctgcca
gtggtcaaagcctccaggaaagctgtgctgagtggctgtaagctgtcagagagaagctgt
gaagctctgtcctcagtcctcagctcccagtcctctagtctgagagagctggacctgagt
aacaacgacctgcaggattcaggagtgaagaacctgtgtgctggactgaagagtccaccc
tgttctctggaaactattaggctgagcgtctgtaacctgtcagagagaagctgtgaagct
ctgtcctcagtcctcagctcccagtcctctagactgagagatctggacctgagtaacaac
gacctgaaggattcaggagtgaagaacctgtgtgctggactagagagtctaccctgtgag
ctggaaactctcagtctgtcaggttgtctggtcacaaacaaaggctgtgcttctctggcc
tcagctcggagctccaacccctctcatctgagagagctggacctgagctacaatcatcca
ggagactcaggaatgatgctgctgtctgttctacagaaggatccactctgcagactgcac
actctcaggtttgaccattgtggagagcagaggttaaaacctgatgtgaggaaatattcc
tgtgaactcacactggacacaaacacagtgcaaagatacctcaaactgtctgacagcaac
agggaggtgacatgtgtggaggaggagcaggaatatcctgatcatccagagagatttgac
ttctgggaacagctgatgtgtagagaagctctgactgatcgctgttcctgggaggtcgag
tggaaaggaagggtttctatatcagtgacttacagaggaatcagcaggagaggagacagt
gaagagtcactgttaggatggaatgatcagtcctggagtctgatctgctctgataaaggt
tactctgtctggcacaatagcaaagacgcaggagcacacaacccctcctcctcctcctcc
tcctcctcctcctcctcctcctccttttccttttccttcttctcctccttcttctcctcc
gcctccgccgcctcctccgaggagaccacttccagtcctgttgtaatgtccctggtctcg
ggggacatggacataacatga
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integrated database retrieval system
