Trematomus bernacchii (emerald rockcod): 117490057
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Entry
117490057 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 9-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117490057
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117490057
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
117490057
NCBI-ProteinID:
XP_033995539
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSQCVDQEEGVPPSVKRPGNEPGTNVKTLIKKFEPAGVTDGHHSEQKKDTTTDPPGIYRG
PLNLPTCKMETTDPKIHHDADSPGPGPSCVSMRSDRSMPRPITFEDGEHDDSPEIHHQRP
DSPESSCDSMRSDRSMPHPLTFKDGEHSDGPRVHQQRSEGPGGPSAQQHQTHLDSIFMLL
EENIVTFVKNELKKIQTVLTSDYPECLESQSEDEEELDDEDEEQRRSSREAFLNISLHFL
RSMKQEELAERLQSRTAAAVCRRKLKSTLKERFQCVFEGIAKAGNPTLLNQIYTELYITE
GGSAEVNEEHEVRQIETASRKPHRPETTIRQEDLFKASPGRDAPIRAVMTKGVAGIGKTV
LTQKFTLDWAEGKANQDIQFXIPFTFRELNVVRENKYSLVELVHHFFSETRDAGICRFDQ
LLVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAA
ANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFC
WISATVLEEVLKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPHWSPESRKMM
ESLGKLAFEQLQKGNLIFYESDLTECGIDITAASVYSGVFTQVFREERGLYQDKVFCFVH
LSVQEFLAALHVHLTFINSGVNLLAEEPTTSWLPKVFMDKPKLTHLYQSAVDKALQSPNG
HLDLFLRFLLGLSLQTNQTLLRGLLSKTGSSSEIIKQTVQYIKKKIEEDLSAERSINLFH
CLNELNDRSLVEQIQQSLRSGSLSTDNLSPAQWSALVFFLLSSGEDLDVFDLKKYSASEE
ALLRLLPVVKASRKAMLSGCKLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVDLLS
AGLKSPLCELETLKLSGCLVSNKGCVSLTSALSSNPSHLRELDLSYNHPGDSGEKLLSAL
QEDPHCRLETLRLDHGGEKWLKPGQRKYSCELTLDTNTAQRQLKLSDSNRKVTRVREKQR
YPDQPERFDFYPQLMCREALTGLCYWEVEWSGGVDISVTYRGIRRRGRSEESLFGWNDQS
WSLICSGVGNSVWHNKRRTLLSSSTSSSGRVAVYLDRPAGSLSFYRVSSDTLTHLHTFRT
TFTEPLYAGFRLWSHDSSVSLCSL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgtggaccaagaggagggagtccctccctccgtgaagagacctggaaat
gaacctggaacaaatgtaaagactctcatcaagaagtttgaacctgctggcgtcactgat
ggacaccactctgaacaaaagaaggacaccacaacagatccaccaggaatctacagagga
cctttgaacctgccaacctgcaagatggaaaccactgatccaaagatccaccatgatgca
gactctcctggacctggacccagctgtgtgtccatgaggagtgaccggtctatgcctcga
cctattacgtttgaagatggagagcatgatgatagtccagagatccaccatcagagacca
gactctcctgaatccagctgtgattctatgaggagtgaccggtctatgcctcaccctctt
acgtttaaagatggagagcatagtgatggaccaagagttcatcagcagagatcagagggt
cctggtggtccgtctgcccagcagcatcaaactcacctggactccatatttatgctgctg
gaggagaacattgtcacttttgtgaagaacgagctgaagaagatccagacagtcctgact
tcagattacccagaatgcttagagagtcagagtgaggatgaggaggagttggacgatgag
gatgaagagcagaggaggagcagcagagaggcatttctgaacatctcactgcacttcctg
aggagcatgaagcaggaggagctggctgagcgtctgcagagcagaactgctgctgcagtc
tgcagacgtaaactcaaatccaccctgaaggagaggttccagtgtgtgtttgagggcatc
gctaaagcaggaaacccaacccttctgaaccagatctacacagagctctacatcacagag
ggggggtctgcagaggtcaatgaggaacatgaggtcagacagattgaaacagcatccagg
aaaccacacagaccagaaacaaccatcagacaagaagacctctttaaagcctcacctgga
agagatgcaccaatcagagcagtgatgacaaagggcgtggctggcattgggaaaacagtc
ttaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacatccagttc
nacattccattcaccttcagagagctgaatgtggtgagagagaacaagtacagcttggtg
gaacttgttcatcacttcttctctgaaaccagagacgcaggaatctgcaggtttgatcag
ttgctggtcgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccac
aacactgagatcctgactgacgtcacagagtccacctcagtggatgtgctgctgacaaac
ctcatcagggggaagctgcttccctctgctcgcctctggataaccacacgacctgcagca
gccaatcagatccctcctgagtgtgtggacatggtgacagaggtccgagggttcactgac
ccacagaaggaggagtacttcaggaagagattcagagatcaggagcaggccggcaccatc
atctcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgc
tggatctctgctacagttctggaggaggtgttgaaaaccagagagggaggagagctgccc
aagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaacatc
aagtatgatggaggagctgagacagatccacactggagtccagagagcaggaagatgatg
gagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgag
tccgacctgacagagtgtggcatcgatatcacagcagcctcagtgtactcaggagtgttc
acacaggtctttagagaggagagaggactgtaccaggacaaggtgttctgcttcgtccat
ctgagcgttcaggagtttctggctgctcttcatgtccacctgaccttcatcaactctgga
gtcaacctgctggcagaagaaccaacaacctcctggctgcctaaagtctttatggacaaa
cctaaactaacacatctctaccagagtgctgtggacaaggccttacagagtccaaacgga
cacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagactctc
ctacgaggcctgctgtcaaagacaggaagcagctcagagatcataaagcaaacagtccag
tacatcaagaagaagatagaagaggatctgtctgcagagagaagcatcaacctgttccac
tgtctgaatgaactgaatgatcgttctctagtggagcagatccaacagtccctgagatca
ggaagtctctccacagataatctctctcctgctcagtggtcagctctggtcttcttctta
ctgtcatcaggagaagatctggacgtgtttgacctgaagaaatactctgcttcagaggag
gctcttctgaggctgctgccagtggtcaaagcctccaggaaagccatgctgagtggctgt
aagctgtcagagagaagctgtgaagctctgtcctcagtcctcagctcccagtcctctagt
ctgagagagctggacctgagtaacaacgacctgcaggattcaggagtggatctgctttct
gctggactgaagagtccactctgtgaactggagactcttaagctctcaggctgtctggtc
tccaacaaaggctgtgtttctctgacttcagctctgagctccaacccctctcatctgaga
gagctggacctgagctacaatcatccaggagactcaggagagaagctgctgtctgcccta
caggaggaccctcactgcagactggagactctcagactggaccatggtggagagaagtgg
ttaaaacctggtcagaggaagtattcctgtgaactcacactggacacaaacacagcacaa
agacaactcaaactgtctgacagcaacaggaaagtgacacgtgtgagagagaagcagcga
tatcctgatcaaccagagaggtttgacttctatcctcagctgatgtgcagagaagctctg
actggtctctgttactgggaggtcgagtggagcggaggggttgatatatcagtgacttac
agaggaatcaggaggagaggacgcagtgaagagtcactgtttggatggaatgatcagtcc
tggagtctgatctgttctggtgttggtaactctgtctggcacaataagagaagaaccctc
ctctcctcctccacctcctcctctggtagagtagcagtgtatctggatcgtcctgctggc
tctctctccttctacagagtctcctctgacacactgacccacctccacaccttcagaacc
acattcactgaacctctctacgctgggtttcggctctggtcacatgactcctcagtgtct
ctgtgttctctgtag
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