Trematomus bernacchii (emerald rockcod): 117490113
Help
Entry
117490113 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117490113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117490113
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117490113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DHR-2_Lobe_C
HEAT_2
Cnd3
NNH7
Motif
Other DBs
NCBI-GeneID:
117490113
NCBI-ProteinID:
XP_033995591
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MAAGDSSFESLDEINNFSDSGSDYEATLKSTKRKKQAVTGPKPLKRPRDKAALRGSSLSS
TSSPIPTPPTPPLQQQQSRGRSKQASPKPVTRENKGNRGISAKDIYDAVCSGKSAMVTVV
DEWLDSYKQSREAGLLVLINFIVQSCGCKGVVSREMLDSMQNAEIISMLTREFNEDSVNY
PLCTPGPEMRRFKASLCEFTRVLVRSCRNSLIFDEYLFPTLLALLTGLSDSQVRAFRHTS
TLLAMKLMTGLVEVAVIVSVQQQTTQRQYDQENSKRASDRASDRLEELQATISQLQENKA
EVSSMMNATFRGVFVHRYRDRLPEIRAACIEELGVWLINNPEDFLNDGCLKYLGWTLHDK
QSPVRLQCVRALQALYQEKELIGRLELFTSRFKERMLCMVLDKDLDVAVEVVNLLLLIQQ
STEGGLREEECGHIYPLVYASNRGLASAAGVFLFNKLKSVIDSENQVNGTSGNADLLQIL
ITFYIQSEFHEHGAYLVDSLWDVARSELRDWETMTTVLLQESGLMYEEEGALVELMMCAL
RQAAQASPPVGRTSGKKLLGMKDKKAQEHDRRRLTMHFIPLLPQLLAKYSADAGIVTLLL
KAPLYFNLEMYNSVPRLEKYLDQLLFQLCGIVEKHTEVTVLQACSTLFSALCADSYTFSS
RSLLAFSQLLDGLTECFSSYLSDLLQGTADDDSVYSAATTLKRIAALSSAKDMTAWKLFD
PCLELLKSRIESRDLDKELMVSALKCAAFHLMWAKMNAVNSTPAEEELKRLKKEMRSFCK
VCETCLSLNQTEIRDQAFELLCDLLLLYGQTAVRSAPALQMLVLQPSDSLRSDMAAFLMD
YIFSDSDDDELNVEEEMKITLLQRKRNQLAGYCKLVIYGVLDLSAATDVFKHYSKYFKDF
GDIIKETVSKSKLISPVQSAKTICLSLQQVFSEMLTEDHSQQDLSEIRELAKKLAMSFGI
DLHRVRKPLVALHMDGIHFAFREPREGEEPNINLAFLEILSEFSFKLLRQDRTQLAAYLK
SECPSAALSCPSVRMYQCSLEGRSSKPREKEGGDAASSHDTPAAKRKRTTTPGSVASSAR
ESLLDSLIIPSTLPTPALTSTAQRVGAKERAASRKPGVTESDEGSGFTEPESEDDFSIGS
SMRKVKPVKRWNLSSSQTGTSLDQRDLNSNLTLLSLIEDDEEGEEPEIEDDEEVEEPEIE
DDKEGEEPEIDDYESGSNHESEYSLPSTRHTSASVLDELFD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggagactcctcatttgaaagtcttgacgagataaacaacttctcagattct
ggcagtgactacgaggcgacattaaaatccacaaagcggaaaaaacaggcagtgactggt
ccaaagccactcaagagacccagggataaagctgcattgagggggtccagcctcagcagc
actagcagccccatccccacccctccaaccccccccctgcagcagcagcagtcccgaggg
agatccaagcaggcctctcctaaaccggtgacgagagagaacaaggggaaccggggaatc
agtgcaaaggatatctatgatgctgtctgctctggaaagagtgccatggtgacggtggtg
gacgagtggctggacagctacaagcagagccgagaggcggggctactggtgctcatcaac
ttcattgttcagtcctgcggatgcaaaggtgtggtgagcagagagatgttggacagcatg
cagaacgctgaaatcatcagcatgctaaccagagagtttaatgaggactcagtgaactac
cctctgtgtactccaggccctgagatgaggcgtttcaaagccagcctgtgtgagtttact
cgggttctggtgcgctcctgtaggaacagccttatttttgacgagtacctgttccccacc
ctgctggctctgctcaccggcctgtccgactcgcaggtcagagccttcagacacaccagc
accctgctcgccatgaagctgatgactgggctggtggaagtggctgtgatcgtgtctgtt
cagcagcagaccacccagcggcaatacgaccaggagaacagcaagagggcatcggacaga
gcctctgacagactggaggagctgcaggccaccatcagtcagctgcaggagaacaaagcg
gaggtatcctccatgatgaacgctacgtttcgtggtgtgtttgtgcaccgttaccgggac
cggctgcctgagatccgggctgcttgtattgaggagttgggtgtttggctgataaataac
cccgaagactttctgaatgacggatgtctgaagtacctggggtggaccctacatgacaag
caaagtccagtgcgtctgcagtgtgtccgtgccctgcaggccctgtaccaggagaaggaa
ttaattggccgcctggagcttttcaccagcagatttaaagagaggatgctctgcatggtg
ctggacaaagacctggatgtggcagtggaagtggtcaatctgttgctgctgatccaacag
agcacagagggtggtctgagagaggaggagtgcggtcacatctatccgctggtctacgct
tcaaaccgaggcctggcgtctgccgctggcgtcttcctcttcaacaagctgaaaagtgtg
attgacagtgagaaccaggtgaatggtacaagtggaaatgcagacctccttcaaatcctc
atcaccttctacatccagagtgagttccacgagcacggggcgtacctggtggacagtctg
tgggacgtggcgagatctgagctgagagactgggagaccatgaccacggttctgctgcag
gagtctggtctgatgtacgaggaggagggggctctcgtagagctgatgatgtgcgccctc
agacaggcagcgcaggcgagcccccctgttgggaggacttcgggcaagaagcttctcggt
atgaaggataagaaagcccaggagcatgacaggaggcgcctcaccatgcacttcatcccg
ttactgccacagctgctggccaagtactcagcagatgcagggattgtgactctccttctc
aaagctcccctctactttaacctggagatgtacaacagcgtgccgcggctggagaagtat
ctggaccagctgctgtttcagttgtgtgggatcgtggagaagcacactgaggtcactgtg
ctgcaggcttgctccaccctgttcagcgccctctgtgccgacagctacaccttctcctcc
cgctctctcctggccttcagccagctgctggacggcctgaccgagtgcttcagctcctac
ctgagcgacctgctgcagggcactgcagatgacgatagcgtctacagtgcagccactact
ctgaagaggattgcagcactgagcagtgccaaggacatgacagcctggaagctgttcgac
ccttgccttgagcttctgaagagcaggattgagtccagagacctcgacaaagagctcatg
gtgtcggctctgaagtgtgctgcctttcacctgatgtgggctaaaatgaacgcagtcaac
tcaactccagctgaggaggaattaaagcgtctgaagaaggagatgcgctcgttctgcaaa
gtgtgtgagacgtgtctgtctctgaaccagacggagatcagagatcaggcgttcgagctg
ctgtgcgacctgctgctcctgtacggtcagactgcggtccgctcggcgcccgccctccag
atgctggtcctccagccctcagactccctgcgctctgacatggctgctttcctcatggac
tacatcttctctgactctgatgatgacgagctcaatgttgaggaggagatgaagataacg
cttctccagaggaagcgcaaccagctggctggctactgtaagctggtgatctacggcgtg
ctggacctcagcgccgccaccgacgtcttcaagcactacagcaagtactttaaagacttt
ggcgacatcattaaagagaccgtaagcaagagcaaactcatcagccccgtccagagcgcc
aagacgatctgcctcagtctgcagcaggtgttctcagagatgctgacggaggaccacagc
cagcaggatctcagtgagattagagaattggccaagaagcttgccatgagctttggcatt
gatcttcatcgcgtccgcaaaccactggtggccttgcacatggatggtatacattttgca
tttcgggagccacgggagggggaagagccgaacattaacttggccttcctggagatcctc
agcgagttcagtttcaagctgctgcgtcaggaccgcacccagctcgctgcctatctgaaa
tcagagtgtccctctgctgccctctcctgtccgtccgtcaggatgtatcagtgctcctta
gagggccgctcctctaaacccagagagaaggagggaggagatgccgcctcctctcacgat
acacctgcagctaaacgcaagaggaccactaccccgggttcagtggccagctcagccaga
gagtccttgttggacagcctcattatccccagcaccctgcccacccccgccctcacctcc
actgcccagagagtcggagccaaggagcgagccgcctccagaaagcccggagtcacagag
agtgatgagggcagcggcttcactgagcccgagtctgaggatgacttctccatagggtcc
agtatgcgcaaggtgaagcccgtcaagcgatggaatctctcctccagccagaccggcacc
tctctggatcagcgggacctgaactccaacctcaccttactctctctgattgaggatgat
gaagaaggagaagagcctgagattgaggatgatgaagaagtagaagagcctgagattgag
gatgataaagaaggagaagagcctgagattgatgattatgagagtggctccaatcatgaa
tctgaatattcactgccctccacgcgccacacctctgccagcgtcctcgatgagctcttt
gactga
DBGET
integrated database retrieval system
