Trematomus bernacchii (emerald rockcod): 117490140
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Entry
117490140 CDS
T09643
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
tben04210
Apoptosis
tben04217
Necroptosis
tben04218
Cellular senescence
tben04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117490140
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117490140
04217 Necroptosis
117490140
04218 Cellular senescence
117490140
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117490140
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117490140
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
117490140
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C2: calpain family
117490140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
NRDD
DUF5625
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
117490140
NCBI-ProteinID:
XP_033995614
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MPGSRSCTSIINLRFQEGSEGSPSNPAKFKNQDFAQLKDNHLRRGRQFVDQAFPPDSSSL
GDLLELSSLIKLSGRQEAQVKWFRPAEILKLQNNPSEAIFCTKGASRFDFGQGAVGNCWF
LAAISSLTFCKDLMWQVVPMDQNFNNHAGIFHFKFWRFGKWEDVVIDDLLPVMNNQLLFV
HSKDGNEFWAPLMEKAYAKVCGSYTDMNAGSPSEACKDFCGGVNMYYQLQEVHRAGHDDK
LWSSLSNASSCNSMICCGTAQKGSVLVNTVSKSGIVDAHAYSVTAVTEIDYHGSKVRLVR
LFNPWGGEEWTGNWSDKSDMWQRVSPSVRAKCEDRDDGEFWMELEDFCRHFYMLFICCEN
PNFIDGDLNCQWQSQIYDGKWTAGISAGGSWSNRSFDINPQYRMKVNIIDKSEKEDMNIV
LTLMQKSRQQNRNRQSTYPIGINVFKIPPGTTSGRLRIDQLYQLQRQREPRYTNARELVE
MYSMEPGEYLIVPSTVDPYQSADFILTIFSKTDAQITPHDEDDEDEHDHEEGGDLVLPEV
PTDNKKPEEETYDNKAIRDLFNRYADQFGELKDRQLRMLLNDNFPHGTWNGFGYDTCSSM
IAMFDVDKKMTMTLVKFTSLWKKINEYKQHFHRADVNKNGSLSDTEFNVAIKAAEPEIDL
NSGMVRLMTFRYSAFEATTMEGFISLMLRLGKTTSTFKDKSTDGVIHMSWEEWTEFSMYN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatctagatcatgcacctctatcatcaacctgcgcttccaagaaggcagcgag
ggaagtccttccaaccctgccaagttcaagaaccaagactttgcgcagctgaaagataac
cacctccgcagaggccggcagtttgtggaccaggccttcccacctgacagcagctctctg
ggagacctgctggagctcagcagtctgattaagctcagcggtcggcaggaggcccaagtg
aaatggtttcgaccagcagaaatcctgaaacttcaaaacaaccccagtgaagctattttc
tgtaccaaaggagcctcccgctttgactttggtcaaggcgctgtaggtaactgctggttt
ctggctgcgatttcctcactgaccttctgtaaagacctgatgtggcaagtcgtgcctatg
gatcagaacttcaacaaccatgcagggatatttcacttcaagttctggaggtttggcaag
tgggaggatgttgtcattgatgacttactgccagtaatgaacaatcagctgctgtttgtg
cactccaaagatggaaatgagttctgggctcctctgatggagaaagcttatgccaaggtg
tgcggatcgtacacagacatgaatgctggttctccatcagaggcctgcaaggatttctgt
ggaggcgtgaacatgtattaccaactccaggaagtccaccgtgcaggccatgatgacaag
ctgtggagctcactgtccaacgccagcagctgcaactccatgatctgctgcggaacagcc
cagaaagggagtgtgttggtgaacactgtatccaaatctggtattgttgatgcacatgcc
tattctgtcacagcagtcactgagattgactatcacggctccaaagtgaggctggtgcga
ctcttcaacccttggggcggagaagagtggaccggaaactggagtgacaagtccgacatg
tggcaaagagttagcccaagtgtgagggcaaagtgtgaggaccgcgacgatggagagttc
tggatggagttagaggacttctgtcgtcatttctacatgttgttcatctgctgtgagaac
cccaactttatcgatggcgacctcaactgccagtggcaaagccagatttacgatggcaaa
tggacagctgggatatctgcaggcggcagctggtctaaccgttcctttgacataaaccct
cagtatcgcatgaaggtgaatatcattgacaagtcagagaaggaagacatgaacatcgtc
cttactctgatgcagaaatctagacagcagaatcgcaataggcaatcaacttacccaatt
gggatcaacgtctttaagattccaccagggacaacatcgggccgcctgcgtatcgaccaa
ctttaccaattgcaaagacagagggaaccgaggtacaccaatgcgagggagctggttgag
atgtacagcatggagcctggagagtatttgatcgtcccctccaccgtggatccctaccag
agtgcagatttcattctaaccatcttctccaagaccgatgctcagatcactccccatgat
gaagatgatgaggacgagcatgaccacgaggaggggggggacctagttcttcctgaggta
ccaaccgacaacaaaaagcctgaggaggaaacctatgacaacaaggcgatccgtgatctc
ttcaaccgatacgctgatcagtttggtgagctgaaggacaggcagctcaggatgctcctg
aatgacaacttcccgcatggcacctggaatggctttggttacgatacctgcagtagcatg
atcgctatgtttgatgtcgacaaaaaaatgacaatgaccctcgtcaagttcacatctctc
tggaagaaaataaatgaatacaagcaacactttcatcgtgcagatgtgaataagaatgga
tccctgagtgacacagagttcaatgtggcaataaaggctgcagaaccagagattgacctt
aacagcggtatggtgaggctgatgaccttccgttactcagcctttgaagccaccaccatg
gagggcttcatctcactcatgttacgcctgggcaaaacaacaagtaccttcaaggacaaa
tcaacagatggagttatccacatgtcttgggaggagtggaccgagttctccatgtacaac
tag
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integrated database retrieval system
