Trematomus bernacchii (emerald rockcod): 117490201
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Entry
117490201 CDS
T09643
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117490201 (supt6h)
03036 Chromosome and associated proteins [BR:
tben03036
]
117490201 (supt6h)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117490201 (supt6h)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117490201 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_3
S1_RRP5
HHH_9
Tex_N
Tex_YqgF
SH2
Motif
Other DBs
NCBI-GeneID:
117490201
NCBI-ProteinID:
XP_033995706
LinkDB
All DBs
Position
Unknown
AA seq
1751 aa
AA seq
DB search
MSDFIVSEAEESEEEEEELEEKDLKPKKTQRFVEEDDEEEEENTEDQDERGNLRGLIDDA
EEEEEPVAPAPASAAGSDSEEEVVGRHRRKKRNREDDYLDDDDLDLIEENLGVKVKRRKK
KYDRVKTLDDDEDDDDEKDLIADEIFHGDAEGDLEEGEAVDEPLHQADDEEEGEDEESDI
DDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFAEFDADAYDQGEEEEEDQD
EEAWDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRNTDMPERFQLRSIPVKPA
EDDELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQ
QFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKNRKQNLTRLFQKMQAYQFEQIS
ADPDKPLADGVRPLDTSDLERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNTVKTSKKRL
KKIKEVNEDGEEEELEVEEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQF
GENLRDSYQRHETEQFPAEPVELAKDYVCSQFSSPEAVLEGTRYMVAMQIAREPLVRHVL
RQTFQERAKINIKPTKKGKKEIDEAHFAYSFKYLKNKAVKELNGDQFLKMGLAEEEGLLT
INICIDLLGVKGFAGEQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQFLYPQMA
KELKSKLITEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAY
APSRDTPVFCALINGEGEVADFLRLPYFMKRRNAFREDEREKKAHDIETLKKFLSGKKPH
VVAVAGENRDAQMIMEDIKRAISELEQESSVPAVGVELVDNELATLYMNSKKSEVDFRDY
PPLLRQAVSIARKIQDPLIEYAQVCSTDDDILCLKLHPLQEQVVKEDLLCALYFEFINRV
NEVGVDVNKCIAHPHTQSLVQFVCGLGPRKGSQLLKILKQNNTRLENRTQLVTMSHMGPK
VFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPA
GALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNT
EEVFNLLTKDTPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNF
PELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKTVKHPEERVKVGMTVHCR
IMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDKETEDQKQEEDLKKKQQRTPYI
KRVIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREE
GKENAFSLGHTLWINSEEFEDLDEISARFIQPMASFARDLLGHKYFQELGSKDKMEELLV
KTKREKPTFIPYFLSVCKELPGKFILGYQPRGKPRVEYVTITPDGFRYRSQVFPTVNGLF
RWFKDHYQEPVPGVTPSNSSRTRTPASLNATPANINIADLTRAVNSLPRNMTSQMFNAIA
AVTGQNQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPIATPLMTPSYSYTT
PSQQALGTPQYTSTTPQSSHSHGSHPHGSHVSQPSHQSSQHGNPSSTPTSSTSSRGRTPQ
QQQPPPPKPSGSNASAVDWGKMAEQWLKEKEAEGRKKTPRMTPRPSPSPMIESTPMSIAG
DATPLLDEMDR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactttattgtcagcgaggctgaggagtcagaggaggaggaggaggagttagaa
gagaaagacttaaaacctaaaaagacccagcggtttgtggaggaagatgacgaggaagaa
gaagagaacacagaggaccaggatgaacgaggaaatttacgcggactcattgatgatgca
gaagaggaggaggagccggtggcaccagcacctgcaagtgcagcggggagtgactcagaa
gaagaagtagtagggaggcatcgacggaaaaagcgcaatcgtgaagacgactacctggat
gacgatgatttggacctgattgaggaaaacttgggtgttaaagtgaaaagaaggaagaag
aaatacgaccgtgtaaaaacactcgatgatgatgaagacgatgacgacgagaaggacttg
atcgcggatgagatctttcatggagatgccgagggcgatctggaggaaggggaggccgtc
gatgagcccctccaccaagcagatgacgaggaagaaggagaagacgaggagtcagatata
gacgattttattgtggatgatgacggccaacccatcaccaaaaagaggggcaagaagttc
tcaggatacacagatgcagccctccaggaggcccaggaaatcttcggcggagactttgac
ttcgctgaatttgacgcagacgcatacgaccagggtgaggaggaggaggaggaccaggat
gaagaagcttgggaccgacccaagaagcagacaaagaggaggcaaggcaggaagagcatc
tttgagatctacgagcccagcgagctggaaagtagtcacatgaccgaccaagacaacgag
atccgtaacacagacatgccggagaggttccagttgcgatccatccctgttaaacccgct
gaggatgatgagctggaagaggaagcagagtggatcttcagacacggattctccactcta
actatctccatgcaggagagcacagattatctggacagggggacgactacaaacttcagc
aggaagggccccagcacaattgccaagatcaaagaggccctcaacttcatgaggaatcaa
caatttgaggtcccattcatagctttctacaggaaagaatatgtggagccagaactaaac
ataaacgacctgtggaaggtttggcagtgggatgaaaagtggactcagctgaagaaccgg
aagcagaacttgacccgtctgttccagaagatgcaggcctaccagtttgagcagatctca
gctgaccctgacaaacctttggctgacggcgtccgtcctttggacacctccgacctggag
agattgaaagatgtgcagactcttgaagagctgggggatgtttacaaccactttctgctc
tactacggccgagacatccccaagatgcagaacactgtaaagaccagtaagaagaggctc
aagaagatcaaagaagtgaacgaagatggtgaagaagaggaattggaggtagaagaagaa
gaagaagaacagaaaggacctgacctcaagctggcgtctcgtagagatatgtacagcatc
tgtcagagcgtaggacttgatggcttggctaaaaagtttgggttaactccagagcagttt
ggagagaatttgcgtgacagttaccagcgtcacgagacggagcagttcccggccgagccc
gtggagctggccaaagactacgtgtgcagtcagttcagctctcctgaggccgtgctggaa
ggaaccaggtacatggtggccatgcagatcgcccgtgaacctctggtcagacatgtcctc
cgacagacctttcaagagagggccaagatcaacatcaagcccacaaagaaggggaaaaag
gagatagacgaggctcattttgcctactccttcaagtatcttaagaacaaggctgtaaaa
gagctgaatggggatcagttcttgaagatgggcctggcagaggaagaggggctgcttacc
attaatatctgcattgaccttttaggagtcaaaggcttcgccggggagcagacttacttt
gacgagatcaaacagttctactacagagatgagttcagtcaccaggtgcaggagtggaac
aggcagcgaactcttgccatagagagatccctcactcagttcctctaccctcagatggcc
aaggagctcaagagcaaactgatcactgaggccaaggagagcattgtccggtcctgctgc
cgtcggttgtacaactggctgaaagtggctccttaccgaccagatcagcaggttgaggaa
gacgatgatctgatggatgagagtcagggcaaaggcattcgggtgctgggagtagcatat
gcgcccagccgagacacaccagtgttctgtgcgctgatcaacggggaaggggaggtggcc
gacttcctgcgtctgccctacttcatgaagaggaggaacgcctttagggaggatgagaga
gagaagaaggcccacgacatcgaaactctcaaaaagtttctatctgggaagaaacctcat
gtcgtggctgtcgctggggaaaacagagatgctcaaatgatcatggaggacatcaagagg
gccatcagcgagctggaacaagagtcctctgtccccgctgtgggagtggagctcgttgac
aatgagttggccacgctgtacatgaacagcaagaagtctgaggttgactttagggattac
ccccccttgctgcgacaggctgtgtcaatagccaggaagatccaggaccccctgatagag
tacgctcaggtttgcagcactgatgatgatattctctgcctcaaactccacccactgcag
gaacaagtggtgaaggaagatttgctctgtgctctttactttgaattcattaaccgtgtg
aatgaggtcggagtggatgtgaacaagtgcatcgcccaccctcacacccagagcctggtg
cagtttgtctgtggtctggggccgaggaagggctcccagctgctgaagattctgaagcag
aacaacactcgtctggaaaaccgaacccagctggtcacaatgagtcacatgggacccaag
gtgttcatcaactgtgctggtttcatcaagatcgacacggcgtcgctcggagacagtacg
gactcctacatcgaggtcctggatgggtctcgtgttcaccctgagacgtacgagtgggct
cgtaagatggccgtggacgcgctcgagtacgatgaatcggcagaagatgccaacccagcc
ggagctctggaggagatcttggaaaacccagaacgtctcaaagatctggacctggacgcc
ttcgctgaagagcttgagagacagggttatggcaacaagggcattactctgtatgatatc
cgtgcagagctgagctgcaggtacaaagatctgagagtcgcctacagggtccccaacact
gaggaggtcttcaacctgctcaccaaggacaccccagagaccttttatattggtaagctg
atcaccagtatagtaactggtattgctcaccggcggcctcagggagagagctacgaccag
gccatcagaaacgactccaccgggctgtggcagtgtcctttctgccagcaggacaacttc
cccgaactcagcgaggtttggaatcactttgatagtggttcgtgtccaggtcaggccatc
ggggtgcggtccagattagataacggcgtccaggggttcattcccaccaagttcctcagt
gacaaaacggtcaaacaccccgaggagagggtcaaggtgggtatgacggttcactgccgc
atcatgaaaatcgacattgagaaattcagcgtggacctcacatgccgcacctcggatctg
atggacaaggccaatgagtggaagcttcccaaggacagctactatgactttgacaaagag
actgaagaccaaaaacaggaagaggacctcaaaaagaaacaacagcgaacaccatatata
aagcgcgtgatcgcccatccaaacttccacaatatcagtttcaaccaagcggagaaaatg
atggagaccctggaccaaggagacctgatcatcagacccagcagcaagggagagaaccac
ctcactgtcacctggaaggtggctgatggcatctaccagcatgtggatgtgagggaagaa
ggcaaagagaacgcattcagcttgggacacactctctggatcaactctgaggagtttgaa
gatctggatgaaatcagtgctcggttcattcaaccaatggcgtcatttgcccgagatctc
ctggggcataagtactttcaggaattggggagcaaggataaaatggaggagttgttggtc
aagacaaagagggagaagcctacttttattccatactttctatcggtatgtaaagagctc
ccggggaaattcatcctgggctaccagcctcgaggaaaaccaagggttgagtatgtgacc
atcaccccggatggcttccggtaccgctcgcaggttttccccacagtgaacgggttattc
cgctggtttaaggaccattaccaagagcctgtgccaggcgtcactcccagcaacagcagc
agaacaaggactcctgcgtccctgaacgccaccccagcaaatatcaacatcgcagacttg
acgcgagctgtcaactccctcccacgcaacatgacctctcagatgttcaatgccatcgcc
gcggttacaggccagaaccagaaccccaacaccacccccgctcagtggggctccagccag
tacggatacggtggcagcacagggggaggaggggggagctcctctgcgtaccatgtgttt
gctacccctcagcagcccatagcgacgcccctgatgacgcccagctactcgtacaccacc
cccagccagcaggctctgggcacgccgcagtacaccagcaccaccccccagtcctcacac
tcccacgggagccatccacacgggagccacgtgtcacaaccaagccaccaaagcagtcaa
cacggcaacccgtccagcacaccgacatcctccacctcatccagaggacgcacgccacag
cagcagcagccgccgccgccaaagcccagcggcagcaacgcctccgcagtggactggggc
aagatggcggagcagtggctgaaggagaaagaggcggaggggcggaagaagaccccgagg
atgacgccccgcccgtcccccagccccatgatcgagagcacgcccatgtccatcgccgga
gacgccacacccctgctggacgaaatggaccgatag
DBGET
integrated database retrieval system
