Trematomus bernacchii (emerald rockcod): 117490302
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Entry
117490302 CDS
T09643
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117490302 (gabra1)
04082 Neuroactive ligand signaling
117490302 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117490302 (gabra1)
Ion channels [BR:
tben04040
]
Ligand-gated channels
GABA-A
117490302 (gabra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117490302
NCBI-ProteinID:
XP_033995875
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MKGPHIATMGGRSRTAFLCLWASLLVANSVLGAKSSGTNGMTDEQTDNTTVFTKILDSLL
DGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHEMEYTIDVFFRQSWKDERLKFKGPMAV
LRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHL
EDFPMDAHACPLKFGSYAYTRAEVVYVWTREPDLSVVVAEDGSRLNQYDLMGQHVNSGVV
QSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV
LTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVV
PEKQRKKKESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPLPSEPKEEPKPKP
PEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKNPKLTGMGPD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtcctcatattgcaactatgggtggacggagcaggacggcctttctgtgtctg
tgggcttccttgcttgtggccaacagcgttctaggtgcgaaaagctctgggacgaacggc
atgacagatgaacagacagataacactacagtgttcaccaagatcttagacagccttctg
gatggctatgacaatcgcctcaggccaggactgggagagcgtgtaactgaagtcaagact
gacattttcgtgactagtattgggccagtttcggaccatgagatggagtacactattgat
gtcttcttcagacagagctggaaggatgaacggttaaagttcaaaggccccatggccgtg
ctacgtctcaacaacctgatggccagcaagatctggacccccgataccttcttccacaac
ggcaagaagtccgtggctcacaacatgaccatgccgaacaagctgctgcgaattacagag
gaaggaactctgctgtacaccatgaggcttacagtaagagcagaatgtcccatgcacctg
gaagacttcccgatggatgcccatgcttgtccactgaaatttggcagctatgcctacact
cgagcagaggtggtgtatgtgtggaccagagagcccgacctgtccgtggtggtggcggag
gatgggtccagattaaaccagtacgatctgatggggcaacatgtgaattctggtgtggtg
cagtccagcacaggagagtatgtcgtgatgacaacccacttccacctgaagaggaaaatt
ggttactttgtgatccagacatatctaccctgcatcatgacagtcatcctctcccaagtg
tctttctggctcaacagagagtctgtccctgccaggactgtctttggagtgaccactgtc
ctgaccatgaccactctcagtatcagcgccaggaactccctccctaaagtggcctatgcc
acagctatggactggttcatcgctgtgtgctacgcctttgtcttctcggctctcattgag
tttgccacagtcaactacttcaccaagaggggttatgcctgggatggaaaaagtgtggtg
ccagagaagcaaaggaagaagaaggagtccctcctcaagaaaaacaacaccacagcctac
ccagctgccactgctacagccttcgcccccaatattgccagggaccctggattggccact
attgccaaaagcgcccccccactcccctctgagccaaaggaggagccaaagcccaaacct
ccagaggccaagaagacctttaacagtgtgagcaagatagacaggattgccagaatagcc
ttcccattgctctttggaacctttaacctggtctactgggcaacttacttgaataagaat
cccaaattaacggggatgggtccagactaa
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