Trematomus bernacchii (emerald rockcod): 117490316
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Entry
117490316 CDS
T09643
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117490316 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117490316 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117490316 (vps36)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
117490316 (vps36)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117490316 (vps36)
Exosomal proteins of colorectal cancer cells
117490316 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
Motif
Other DBs
NCBI-GeneID:
117490316
NCBI-ProteinID:
XP_033995907
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDVKNHECCIA
MPLSQILLFEEQAAGIGKSAKIVIHLQETPANKEPGPYQNSKYSFIKLSFKEHGQIEFHR
RLTEEMTQKRWESTPVSQPISAGTSSQAGRTRAVGIVGIERKIEEKRKETDKNICEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDISEDETIRFKSYLLSMGIANPVTRETYGTGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDYVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKVGHLCRDDSVEGLRFYPNLFLNA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttttcgtggtcaaatgggctcttagaaattaacgaaactttggttattcag
cagcggggtgtcaggctgtatgacggagatgataaggctaaactggatgttggagtggcc
ttgttgagcacacatcggttgatctggagggacgttaaaaaccatgaatgctgtattgcc
atgcctctgtcacagattctcttatttgaggagcaggctgcagggataggaaagagtgca
aaaatagttatccacctgcaagaaacacctgccaataaggagccgggtccctaccaaaac
agcaagtactccttcatcaagctttcattcaaggaacacgggcagattgagtttcacagg
agactaacagaggaaatgactcagaagagatgggagagtacaccggtgtcacaacccatc
tccgcaggaactagctcacaggcgggaagaacgcgtgccgtgggtattgttggcattgag
aggaagatagaggagaagaggaaagaaacagacaaaaacatttgtgaggcttttgaggac
ctcagtaagctgatggtgaaggccaaagagatggtggagctgtccagatctattgccaac
aaaatcaaagacaagcagggagacatttcagaagacgagacgatacggttcaagtcctac
ctgctcagcatgggtattgccaaccctgttaccagagaaacgtatgggacgggtacacat
taccatatgcagctggctaagcagctgggagatatgctacaggcccctctagaggagcgt
ggcggtatgatggctctcactgaggtgtactgtctcgtaaaccgcgccagagggatggag
cttttatctccagaagatttggtaaacgcgtgcaagatgtttgagtcgttgaagctaccg
ttgaggctacgtgtgtttgacagtggtgtgatggtggtccagctgcagtctcacagtgaa
gaggaaatgatcgcctcagcactggactatgtgaccgacaaaggctctttgacagcagag
gagtttgcaaagctcttgggtctctctgttcttctgtctaaagagcgattgttgctggct
gagaaggtgggccacctctgtcgagatgactctgtggagggtctgagattctacccaaat
ctctttttaaatgcttag
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