Trematomus bernacchii (emerald rockcod): 117490353
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Entry
117490353 CDS
T09643
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117490353 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117490353 (sec24a)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117490353 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
117490353
NCBI-ProteinID:
XP_033995958
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MSTAGFNSQNGTGTGQTYTNGPSQNPVAVQQLPGGSYGMTQQPTYNPMQAKAPAPLGPGL
YPSGPYQPAPPVSSYQHAPPVSSYQPAPPGQPLMTRPLLGGPPSHTPPQSASPGPRLPPP
QATPPPPAVSSSNYYPNPQQPQHMPPAWQYNNAPPPMGSPSSMGTPPRGAMANHVNPAAS
STAPLLPPSAAYSSAPAAHVSHSGAQPPGPGSPPTSLHGYIQPGTAPPPMNPMAPNTYQP
SRASYGPPPTGPPPTMKPTAPPTGPPMANAKPPPPRADAQCGGAVNSTLPPTEPDCQDGD
IECPGTMAGNGPQASNSHNHVDNKMAGMPQHGPPGRHLGHYPSLPPGYQNTPAPHNAPPP
MHPALQAATQPYTQAHQPYQQPPGGPGPAQLSPSLAAMSLQSNTPESLRVVNLLQERNLL
PPSPTPPPTPCLPQDLQKINCNPEVFRSTLTSIPQTQSLLNKAKMPLGLMLHPFKDLSQL
PVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCHRVNDVPEEFMYNPVSRSYGEPHKR
PEVQNATIEFIAPSEYMLRPPQPAAYLFVLDVSHNAVETGYLNVFCQSMLENINALPGDS
RTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNECKELVQDLLK
SLPTLFQKTMETQSALGSALQAAFKLLSPTGGRMTIFQTQLPNLGVGALQSREDPNQRAS
AKDIQHLSPATDFYKKLALDCSGQQVSVDLFLLSSQYCDLASLGCISRYSAGTVYYYPSY
HHQRNPALVECFQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNV
NPDAGFAVQMSIEENLDDLQVVSFQAALLYTSSKGERRIRVHTLCLPVVNSLSDIFAGAD
VQAISGLLACMAVDRSATASLSDARDAMTNAAIDSLTSYRQSVLTIQQPGLLAPACLRLF
PLFILALLKQKAFRTGTSTRLDDRVFAMLQLKYQPLVYSLLMIHPALYRVDDLTDEGALN
INERTIPQPRVLQLSVEKLSREAAFLMDAGTVMYLWIGRNCHPNFLSQVLGVPSYAAVPD
NLYLLPELDTAESQRTRAFIGWLRDQRPFFPPMHVIREESQLKSTFMQNMIEDRTESALS
YYEFLLHLQQQISK
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcagggtttaactctcagaatgggaccgggacaggacagacatacaccaat
ggtccgtcacagaatccagttgctgtgcagcagcttccagggggcagctatggaatgact
caacaaccaacctacaatccaatgcaggccaaagctcctgcacccctcggccctggactc
tacccctctgggccctaccaacctgctcccccagtcagctcctaccaacatgccccccct
gtcagctcctaccaaccagctcctccaggccagccgctgatgaccagacctctgttggga
ggtcctccatcccacaccccccctcagtctgccagccctggtccgagattgccccctcca
caggccacacctcctcctcctgctgtgtcttcaagtaactattaccctaacccccagcag
ccccagcacatgcctccagcatggcagtacaacaacgctcccccaccaatggggtcaccc
tcttccatgggcacacctccccgtggcgccatggccaatcatgtgaacccagctgcaagc
tcgacagcgccgctgctgccaccgtcagcagcttacagctctgcaccggcagcccatgtt
tcccatagtggcgcacagcctccaggcccagggagcccccccacctctctgcatggatat
atccagccaggcacggcacctccacctatgaatcccatggctcctaacacataccaacca
agcagagcatcctatggccccccacctacaggcccaccaccaaccatgaaacccacagcc
cctcccactggaccgccaatggccaatgctaaacctccaccccccagggccgatgctcag
tgtgggggtgccgttaacagcactttgccccccactgagcccgactgccaggacggggat
attgaatgtccaggaaccatggctggcaatggcccacaagcatcaaacagccataatcat
gttgacaacaaaatggctggcatgcctcagcacggtccaccgggtcggcacttgggccac
tacccctccctcccccctgggtaccagaacaccccggctcctcacaatgcccccccaccc
atgcaccctgcgctgcaggccgccacgcagccttacactcaagcacatcagccgtaccag
caaccgcctggtggccccgggcccgcccagctgagcccgtccctggcagccatgagcctc
cagtccaacaccccagagtccctgagggtggtcaacctgctgcaggagaggaacctgcta
cccccgagccccaccccccctccgacaccctgccttccacaggacctgcagaagatcaac
tgcaacccagaggtttttcgtagcacgctgactagcatccctcagactcagtcgctgctc
aataaagctaagatgccgctgggcctgatgctccaccccttcaaagacctctcgcagctt
cctgtggtgacatccagcaccatcgtccggtgtcggtcctgcagaacctacatcaacccc
ttcgtctcgttcctggaccagaggaggtggaagtgcaacctgtgtcatcgggtcaatgat
gttccagaggagtttatgtacaacccagtcagcagatcgtacggagagcctcacaaaaga
cccgaggtccagaacgccaccatcgagttcattgctccttcagaatacatgctgaggccc
ccccagcctgcagcttacctcttcgttctcgacgtatcccacaatgcagtggaaacaggc
tacctgaatgtgttctgccagtcaatgctggaaaacatcaatgcgcttcctggagactct
cggacaaaggtaggtttcatcacctttgacagcaccatccacttctacaacctccaggag
ggactttcacagcctcagatgctcatcgtgtcggacatcgaagatatctttttaccaaca
ccagacagccttctagtaaacctcaatgaatgcaaagagcttgtgcaggatctgctgaag
agcctccccactttgtttcaaaagacaatggagacccagtctgccctgggttcagctctg
caagcagccttcaagctgctgtcgcccaccggagggcgcatgaccatctttcagacccag
ctgcctaacctcggtgtgggggcccttcaatccagagaagaccccaaccaacgggcatct
gccaaggatatccagcacttatccccagcgacagacttctacaagaagctggctctggac
tgctccggccagcaggtgtcggtggacctgttcctgctcagctctcagtactgcgacctg
gcatcgctcggctgcatatccagatactctgcagggactgtttactactacccatcctac
catcaccagcgcaaccccgctttggtggagtgcttccagaaggatctgaagagatactta
accaggaagatcggcttcgaggccgtcatgaggatacgctgcaccaaaggtctgtccatc
cacacgttccacggaaacttctttgtgcgctccacggatctgttgtcccttcccaacgtg
aacccagacgctggctttgcggttcagatgtccatcgaggaaaaccttgacgacctgcaa
gtcgtctccttccaggctgcactgctctacacgtccagcaaaggagagagaaggatccgt
gtccacaccttgtgtctacctgtggtcaactctctgtcggacatctttgctggagctgat
gttcaagccatcagcgggctgcttgcttgcatggctgtggaccgctcggcgacggccagt
ctgagtgacgccagagatgcgatgaccaacgctgccatcgactcgctgacgtcgtaccgg
cagtccgtgttgaccatccagcagcccggcctgctggcccccgcctgcctcagactcttc
cctctcttcatcctcgccctgcttaaacagaaagccttcaggacgggcaccagcaccagg
ctggatgaccgtgtgtttgccatgcttcagctgaagtaccagccactggtctactctctg
ctgatgatccaccctgctctgtaccgtgtcgacgatctgaccgatgagggagctttgaac
atcaatgagcggaccatccctcagcccagagtgctgcagctgtctgttgagaagctcagc
agggaggcagcattcctcatggatgctggaacggtgatgtatctgtggatcggacggaac
tgccaccccaacttcctctcacaagtcctgggagttcccagctacgctgctgtgcctgat
aacctgtatctgctcccagagctggacacggccgagtcgcagagaaccagagctttcatc
ggttggctgagggatcagaggcccttcttccccccaatgcatgtcatcagggaagagagc
cagctgaaatccacttttatgcagaacatgatcgaggaccgaacagagtcggccctgtcg
tactacgagttcctgctccacctccaacagcaaatctccaaataa
DBGET
integrated database retrieval system
