Trematomus bernacchii (emerald rockcod): 117490363
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Entry
117490363 CDS
T09643
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117490363 (ddx52)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117490363 (ddx52)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
90S particles
Helicases
117490363 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
117490363
NCBI-ProteinID:
XP_033995970
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MLTSDVWMRTEPHAAAKMDAFELFRKLGAGAKFDLKRFGQDAARFKGAKSHGGEASVDTL
SAIDYFGTAQTNGSKSRVVKVTEDEKDDGEECEVESGDSGAGGKRKKRDQEKDVRTKKKK
MKKDQVAAKDSEGSGITWTSSLDRKVQNLSTDGKEKSSLKRLKHLHQEKVNLIRSQHRIN
VHGCDVPDPVCTFEELQSEYRLSPRVIQNLKEAGLSSPTPIQMQAIPLMMHSRELLACAP
TGSGKTLAFCLPLLAHLQQPTNLGFRAVVISPTRELANQTYRELLRLSEGVGFRVHIIDK
ASLAAKKYGPQSNKKYDILVSTPNRLVFLLNQDPPALDLSSVEWLIVDESDKLFEGGKTG
FREQLAAVFLACSGSKVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNTAVESVEQKL
LFVGTENGKLVAMRNIITKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQ
RDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVLNYDFPTSSVEYIHRIGRTGRAGHLG
KAITFFTENDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEQRPPKRSTICTTP
RFLIKKKGQGPNNGQKGEKQAAGGEQESENVPQTAAKKPKGEKKPKGEKKAKGKELMKRM
KTQKKVGSEKKASQKEGSNSSGARLKKKKGKKNKPQED
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgttgactagtgatgtctggatgaggacagagccgcacgctgctgcaaaaatggacgcc
ttcgagttgtttcgaaaactcggagctggagctaaatttgacctgaagaggtttggtcag
gacgctgcaaggtttaagggtgccaaatctcacggaggggaagcgtccgtagatactctc
tctgctatcgattactttggcacagcacaaaccaatggatccaagagcagagttgtaaag
gtgactgaggatgaaaaggatgatggagaagagtgtgaggtggaaagtggagattctgga
gcaggaggtaaaagaaaaaaaagggatcaagagaaagacgtgaggaccaaaaagaaaaag
atgaaaaaagaccaggtggcagccaaagactcagaggggagcggcatcacttggacctcc
tcattggatagaaaagtccaaaacctgtcgactgatgggaaggagaaatcctcgctgaag
aggctgaagcatcttcatcaggaaaaggtgaatctcattcgctctcaacaccgtataaat
gtgcacggctgcgacgtaccggaccctgtgtgcacgtttgaggagctgcagtcagaatat
cgtctcagcccgcgggtgattcagaacctcaaggaagccgggctgagctccccgacgccc
atacagatgcaggcaataccgctcatgatgcatagtcgagagctcctggcttgcgctccc
acaggatcaggaaagactttggccttctgtctcccgctgctcgcccacctgcagcagccc
accaacctgggcttcagagctgtggtcatctcccccaccagagaactggccaaccagacc
tacagagagctgctccgcctgtcagagggagtaggattcagagttcacataatagacaaa
gcctctctggcagccaagaaatatggaccacagtcaaacaaaaaatacgatatacttgtc
agtactccaaacagactggtcttccttctcaatcaggatcctccggctctcgacctcagc
agtgtggagtggctgattgttgatgagtccgataagctgtttgagggcggtaagacgggc
ttcagggagcagctggccgcagtctttctggcctgttctggttcaaaggtgcgccgggct
ttcttcagtgccacctgcacaccggatgtagagcagtggtgccgtctgaacctcgacaac
ctggtctctgtcaacattggacacagaaatacggcggtggagtcggtggaacagaagctg
ctgtttgttgggacagagaacggaaaactggtggccatgaggaatatcatcacaaagggt
ttcctgcctcccatgctggtgttcgtgcaatctatcgatcgagcacgggagcttttccat
gagttggtgtatgaaggtatcaacgtggacgtgatccacgcagaccgcacacagcagcag
agggacaacgtagtgaacagtttccggtccggtaagatttgggtgttgatctgcacggct
ctgctcgccagaggaatcgatttcaaaggagtcaacctcgtgctgaactacgacttcccc
accagctctgtggagtacatccacaggattggtcgaactggtcgagctggacatctgggg
aaggccatcaccttcttcacagaaaatgacaaaccactgctgcgcagcatcgctaatgtc
attaaacaagctggctgtcctgtacctgactacatgattggtttcaagaagattcacagc
aaagtgaagcggagacttgagcagagacctcccaagagaagcaccatttgcacaactcct
cgattcttaattaagaagaaaggccaagggccaaataacggacagaaaggagagaagcag
gcggcaggtggagagcaggagagcgaaaatgtgcctcaaaccgcagcgaagaagccaaaa
ggggaaaagaagccaaaaggggaaaagaaggcaaaaggaaaggagctgatgaaaagaatg
aagacacagaaaaaagtgggaagtgagaagaaggcgtctcagaaggagggatccaactca
tctggagccaggttaaaaaagaaaaaggggaagaagaataagcctcaggaggattag
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