Trematomus bernacchii (emerald rockcod): 117490402
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Entry
117490402 CDS
T09643
Name
(RefSeq) transcription factor COE1-like
KO
K09103
early B-cell factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117490402
Transcription factors [BR:
tben03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
117490402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_HLH
TIG
COE1_DBD
HLH
Motif
Other DBs
NCBI-GeneID:
117490402
NCBI-ProteinID:
XP_033996030
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MGHVLSVSDNMFVHNNSKHGRRARRLDPAEGTQGYLEHGSAPCIKAISPSEGWTTGGATV
IIIGDNFFDGLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPG
RFIYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVILKRAADLVEALYGLPHNNQEII
LKRAADIAEALYSVPRGHSQLSGSTHSGMMGVNSFTGQLSVNVAEPSQGNQGFVRSSSSV
SPHGYVPSSTPQQTGYTSVTSSMNGYTNNTGMTNLGGSPTFLNGSAANSPYAIVPSSPTM
ASSTSLPSNCSSSSGIFSFSPANMVSAAVKQKSAFAPVVRPSSSPPPSCTNGNGLQDQTF
VDSSKYSTANSLQGLAFT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgggacatgtcctgtcagtctccgacaacatgttcgtccacaacaactccaaacatggc
cgacgggcccgcagactcgaccccgcggaaggaacgcagggatacctagaacatggctcg
gcgccctgcattaaggccattagtcccagtgaaggatggactacaggaggcgctacagtc
atcatcataggagacaacttcttcgatggtctccaagtcatcttcggtaccatgttggtt
tggagcgagttgatcacgccgcatgccatccgggtgcagacgcctcccagacacatcccc
ggggtcgtcgaggtcactctgtcctacaagtccaaacagttctgcaaaggcacaccagga
aggttcatatacacagcactgaacgagccgaccattgactacggtttccagaggcttcag
aaggtcatccctcggcaccctggggacccagagaggctgccaaaggaggttattttaaag
agagcagctgacctggtagaagccctttatggtttaccccataataaccaggagatcatc
ctgaagcgtgcggcggacattgcagaagctctatacagcgttccccgaggacacagccag
ctctccggctccacacacagcggcatgatgggggtcaactccttcaccgggcagctgtcc
gtcaacgtcgctgaaccctcacagggtaatcagggttttgtgcgcagcagcagtagtgtg
tctcctcacggttacgttcccagctccacgcctcagcagaccggttacacttctgtcacc
agctccatgaacggctacaccaacaacaccggcatgaccaacctgggaggatcgcccact
ttcctcaacggctctgcagccaactcgccttatgctattgtcccatccagtcccactatg
gcctcctccacctctctcccctccaactgctcctcctcttctggcatcttctccttctcc
ccggccaacatggtgtcggcggccgttaagcagaagtcggccttcgctccagtggtccgg
ccctcctcttcccccccgccctcctgcaccaacggcaacgggctccaagatcaaacattt
gtggactctagcaagtactcaacagccaactctctacaaggcctggccttcacctga
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