Trematomus bernacchii (emerald rockcod): 117490698
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Entry
117490698 CDS
T09643
Symbol
smpd4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00600
Sphingolipid metabolism
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117490698 (smpd4)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117490698 (smpd4)
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Ortholog
Paralog
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Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
117490698
NCBI-ProteinID:
XP_033996374
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
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MAAPTLQQPSFLLANLRNDSTTKPLLHRCQDLVKIIDDYPAKELHVIFPWLVETVFGSLD
GILGGWNLRLLQARSHEYNIALEFLSPSGPMMKLVYKLQAEEYKYEIPVNYLPGPVKACI
QQGVLPECPLFHNKLQFPLSGLLTLNLALNPFEFFMFNFAYCLITPKPPPQQQGSSTDSA
YFVLVDMYLKYFLPSEGSVPPSPFSDSRGSVTAPSPRSTSVSFSGYGVHSPSLLKHHIFQ
QPSVNADPAAQEIWRSETLLQMFVEVWLHHYSLEMYQKLQSPQVKLALLQYRLSMSSMPS
QPFTPPGSGTLNTYQVLLPFHSPLSLWGLLEEPFSPTEEHVLVVRLLVKNLHAFSNSLKP
DQLTSSPPTHSHTHTHTSPLEEFKRVVVQRFVQQKLYLFLQHCFGHWPLDASFRAVLETW
LSYIQPWRYTGEKINPQADQNRTVPEKWESFVQENLLMYTKLFQVLLNRAVRTDLVNAKN
ALMVFRVSKVFAQPNLADMIQKGEQLFLEPEHVLHHRQPRGYLTPNQGGSFLSSRQRVVT
DMVFRVKSHVYALEGQDCQYKQMFGNELRGAVMKLIQIIAQARQTAKRISDHSNEVAASN
SFLSWFGVGSSDLNNTFSGAEPEESGECLKKTHEFLDRALEHLCQIFKLNQGQLTQLIST
LGSCQDEGNCKQLPDCIQGENGLMLTDLGRKQIISGQRRFDIQYQGDPELQPIRSYESAL
LVRLLYRVSSLINLRFGAHMDAVCSRPDFPGRLCRHFLSDGDSAPRLNQSPLSRRWSERP
RRPRLSLRRLASFRTLMVLLLIYGLGAILSFSPVSSSIIILTGGFLYGLVLTLLQDKLKT
H
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccaacgttacaacagcccagtttcctgctggctaatctgagaaacgactcg
accaccaaacctctcctccaccggtgccaggatctggtgaaaatcatcgatgattatcct
gcaaaggagctgcatgtgatcttcccctggctggtggagacggtgttcggcagtctggac
gggatcctcgggggctggaacctcaggctgctgcaggccaggagccacgagtacaacatc
gctctggagttcctcagccccagtgggcccatgatgaagctggtgtacaaacttcaagca
gaagagtacaaatatgaaatacccgtcaactatctcccgggtccggtgaaggcgtgcatc
cagcagggcgtcctcccagaatgccctctgttccacaacaagctgcagttccccctcagc
ggactcctcactctgaacctggcactcaatccatttgaattcttcatgtttaactttgcc
tactgcctcatcacaccgaagcccccccctcagcagcagggcagctccactgacagcgcc
tactttgtgctggtggacatgtacctgaagtacttcctgcccagtgaaggcagcgtcccc
ccctcgcctttctccgactccagaggctccgtcactgctccctcacccagatctacgagc
gtgtccttctctgggtacggcgtgcacagccccagcctcctgaagcatcacatcttccag
cagccgtcagtgaacgctgacccggcagcgcaggagatctggaggtcagagactctgctg
cagatgttcgtggaggtgtggctccatcactattcgttagagatgtatcagaagctgcag
tctcctcaggtaaagttggcgttgcttcagtaccgcctcagtatgtccagcatgccgagc
caacccttcaccccaccaggctctgggaccctcaacacctaccaagtactattacctttt
cattcacccctgtccctctggggtctcctggaggagccgttcagccccacggaggaacac
gtgttggtggttcgtctcctggtgaaaaacctccacgccttctcaaacagcctgaagccg
gatcagctgacctcttcccccccgacacactcacacacacacactcacaccagccccctg
gaggagttcaagagagtggtggtgcagcgcttcgtgcagcagaagctctacctgttcctg
cagcactgcttcggccactggcctctggacgcctccttcagagcggtgttggagacgtgg
ctcagctacatccagccgtggagatacaccggagagaagatcaaccctcaggccgaccag
aacagaacggtgccagagaaatgggagtcctttgtgcaggagaacctcctcatgtacacc
aagctcttccaggttctgctgaaccgagccgtcaggaccgatctggtcaacgccaaaaac
gctctgatggttttcagagtctccaaagtgttcgctcagccaaacctcgccgacatgatc
cagaaaggagagcagctgtttctggagccggagcacgtccttcatcaccggcagccgaga
ggatacctgacgccgaatcagggaggcagcttcctgtcgtcacggcaacgcgtggtgaca
gacatggtgttcagggtgaagagtcacgtctacgctctggagggacaagactgccagtac
aagcagatgttcggaaacgagctcagaggagcggtcatgaagttgatccaaatcatcgcc
caggcccgacagacggccaagaggatttctgatcactccaacgaggtggcggccagcaac
tcgttcctctcgtggttcggggtgggatcctcggacctgaacaacacgttctccggcgcc
gagcccgaggagagcggcgagtgtttgaagaaaacccacgagttcctggaccgagcgctg
gagcacctgtgtcaaatcttcaagctgaaccagggtcagctgactcagctcatctccact
ctgggctcctgtcaggacgaagggaactgcaaacagctgccggactgcatccagggagag
aacggactcatgctcaccgacctgggccgcaaacagatcatcagtggccagcgcaggttt
gacatccagtaccagggcgacccggagctgcagccaatcaggagctacgagagcgccctg
ttggtccgcctcctctacagggtctccagtctgatcaacctcaggtttggagctcacatg
gacgccgtttgctcccgtccggacttcccgggtcgcctgtgtcgtcacttcctgtctgac
ggtgactccgcccccaggctgaatcagagcccgttgtcgcggcgatggtcagagcgtccg
aggcgtccgaggctgagcctgcgtcggctcgccagcttcaggaccctgatggttctcctg
ctgatctacggcctgggagccattctgtccttcagccccgtctccagctccatcatcatc
ctcaccgggggcttcctgtacggactggtgctcacactgctgcaagacaaactgaaaaca
cactga
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