Trematomus bernacchii (emerald rockcod): 117490904
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Entry
117490904 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117490904
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117490904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
PRY
NOD2_WH
SPRY
LRR_4
DFF-C
Motif
Other DBs
NCBI-GeneID:
117490904
NCBI-ProteinID:
XP_033996573
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MHEPMRFQRQSSKKIQVETILARWKLEEPEPSCVSMKSDWSMGHPYKFKEGHHSDGQSPE
QHGPGPGPGPGPGPGPGPSCVSIKSDWSMHKPMRFQRQSSKKIQVETILARWKLEEPEPS
CVSMKSDWSMDHPYKFKEGHHSDGQREDQQSSEVPRGQSAQQHQTQLDSIFMLLEENIIT
FVKNELKKIQKALSSDYPEFLESQREDEEVLDVEDEEQRRSSREAFLNITLHFLRSMKQE
ELADRLQSRLITGVCQRKLKSTLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEV
NDEHEVRQIETASRKPDRPETTIRQEDLFKASPGRDAPIRAVMTTGVAGIGKTVLTQKFT
LDWAEGKANQDIQFTFPFTFRELNVVRENKYSLVELVHHFFSETRDAGICRFDQFPVVFI
FDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIKGKLLPSARLWITTRPAAANQIPP
ECVDMVTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISATV
LEEVLKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDHHWNKKSRKMMESLGKL
AFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEF
LAALHVHRKCINSRMNLLSEEATTSRRPKVFRPKPELTHLYQSAVDQALQSPNGHLDLFL
RFLLGLSLETNQKLLRGLLTQTGSSSETEEETVQYIKKKMDEDLSPERSINLFHCLNELN
DHSLVEQIQESLSSGSLSTDNLSPAQWSALVFILLSSGEDLDVFDLKKYSASEDALLRLL
PVVKASNKALLSGCKLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSAGLESP
HCTLETLRLSGCKLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSAGLESPHC
TLETLRLSVCNLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVTLLSAGLESPPCTL
DTLRLSGCNLSKRSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSAGLESPHCTLES
LSLSGCLVTEEGCVSLTSALRSNPSHLRELDLSYNHPGDSGEKLLSAGLEDPLWRLDALR
MEPGGVRWLRPGLRKYSCELSLDTNTAHRQLKLSDNNRKVTCVEVEQPYPDHPERFDYWR
QLMCREALTGRCYWEVEWRGGVTISVTYRGIRRRGASDDCLFGGNDQSWSLICSDGRYSV
RHNKRETHISSSSSSSSSSSRRVAVYLDHPAGSLSFYRVFFNRLTLLHTFRTTFTEPLYA
GFGFTVWSGSSVSLCPL
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaccaatgcgttttcaaagacaatcttcaaagaaaatacaagtagagactata
ctagcaaggtggaagctggaagaacctgaacccagctgtgtgtccatgaagagtgactgg
tctatgggtcatccttataaattcaaagaaggacatcactctgatggtcaaagcccagag
cagcatggacctggacctggacctggacctggacctggacctggacctggacccagctgt
gtgtcaataaagagtgactggtcgatgcacaaaccaatgcgttttcaaagacaatcttca
aagaaaatacaagtagagactatactagcaaggtggaagctggaagaacctgaacccagc
tgtgtgtccatgaagagtgactggtctatggatcatccttataaattcaaagaaggacat
cactctgatggtcaaagagaggaccagcagagctcagaggttcccagaggtcagtctgcc
cagcagcatcagacacagctggactccatatttatgctgctggaggagaacatcatcact
tttgtgaagaatgaactgaagaagatccagaaggctctgagttcagattacccagaattc
ttagagagtcagagggaggatgaggaggtgttggacgtggaggatgaagagcagaggagg
agcagcagagaggcatttctgaacatcacactgcacttcctgaggagcatgaagcaggag
gagctggctgaccgtctgcagagcaggctaattactggagtgtgtcagcgtaaacttaaa
tccaccctgaaggagaggttccagtgtgtgtttgagggcattgctaaagcaggaaaccca
acccttctgaaccagatctacacagagctctacatcacagagggggggtctgcagaggtc
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaa
acaaccatcagacaagaagacctctttaaagcctcacctggaagagatgcaccaatcaga
gcagtgatgacaacgggcgtggctggcattgggaaaacagtcttaacacagaagttcact
ctggactgggctgaaggcaaagccaaccaggacatccagttcacatttccattcaccttc
agagagctgaatgtggtgagagagaacaagtacagcttggtggaacttgttcatcacttc
ttctctgaaaccagagacgcaggaatctgcaggtttgatcagttcccggtcgtgttcatc
tttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgact
gacgtcacagagtccacctcagtggatgtgctgctgacaaacctcatcaaggggaagctg
cttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcct
gagtgtgtggacatggtgacagaggtccgagggttcactgacccacagaaggaggagtac
ttcaggaagagattcagagatcaggagcaggccggcaccatcatctcccacatcaagacc
tcacgaagcctccacatcatgtgccacatcccagtcttctgctggatctctgctacagtt
ttggaggaggtattgaaaaccagagagggaggagagctgcccaagaccctgactgagatg
tacatccacttcctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagct
gagacagatcaccactggaacaaaaagagcaggaagatgatggagtctctgggaaaactg
gcttttgagcagctgcagaaaggcaacctgatcttctatgagtccgacctgacagagtgt
ggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtctttagagag
gagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggagttt
ctggctgctcttcatgtgcatcgaaaatgtataaattctcgtatgaacctgctgtcagaa
gaagcaacaacctccaggcggcctaaagtcttcagacccaaacctgaattaacacatctc
taccagagtgctgtggaccaggccttacagagtccaaacggacacctggacttgttcctc
cgcttcctcctgggtctttcactggagaccaatcagaaactcctacgaggcctgctgaca
cagacaggaagtagctcagagactgaagaggaaacagtccagtacatcaagaagaagatg
gatgaggatctgtctccagagagaagcatcaacctgttccactgtctgaatgaactgaat
gatcattctctggtggagcagatccaagagtccctgagttcaggaagtctctccacagat
aatctgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcaggagaagat
ctggacgtgtttgacctgaagaaatactctgcttcagaggacgctcttctgaggctgctg
ccagtggtcaaagcctccaacaaagctctactgagtggctgtaaactgtcagagagaagc
tgtgaagctctgtcctcagtcctcagctcccagtcctctagtctgagagagctggacctg
agtaacaacgacctgcaggattcaggagtgaagctgctgtctgctggactggagagtcca
cactgtacactggagactctcagactgagtggctgtaagctgtcagagagaagctgtgaa
gctctgtcctcagtcctcagctcccagtcctctagtctgagagaactggacctgagtaac
aacgacctgcaggattcaggagtgaagctgctgtctgctggactggagagtccacactgt
actctggagactctcagactgagtgtctgtaacctctcagagagaagctgtgaagctctg
tcctcagtcctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgac
ctgcaggattcaggagtgacactgctgtctgctggactggagagtcctccctgtactctg
gacactctcagattgagtggctgtaacctctcaaagagaagctgtgaagctctgtcctca
gtcctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctgcag
gattcaggagtgaagctgctgtctgctggactggagagtccacactgtacgctggaatct
ctcagtctgtcaggctgtctggtcacagaggaaggctgtgtttctctgacttcagctctg
agatccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagagaagctgctgtctgctggactggaggatccactctggagactggacgccctcagg
atggagcctggtggagtccgatggttgagacccggtctgaggaagtattcctgtgaactc
tcactcgacacaaacacagcacacagacaactcaaactgtctgacaacaacaggaaggtg
acatgtgtggaggtggagcagccatatcctgatcatccagagaggtttgattactggcgt
cagctgatgtgcagagaagctctgactggtcgctgttactgggaggtcgagtggagagga
ggggttactatatcagtgacttacagaggaatcaggaggagaggcgccagtgatgactgt
ttgtttggagggaatgatcagtcctggagtctgatctgctctgatggtcgttactctgtc
aggcacaataagagagaaacacacatctcctcctcctcctcctcctcctcctcctcctct
cgtagagtagcagtgtatctggatcatcctgctggctctctctccttctacagagtcttc
tttaacagactgaccctcctccacaccttcagaaccacattcactgaacctctttatgct
gggtttgggtttacagtttggtctggttcctcagtgtctctgtgtcctctgtag
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integrated database retrieval system
