Trematomus bernacchii (emerald rockcod): 117490917
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Entry
117490917 CDS
T09643
Symbol
nlgn1
Name
(RefSeq) neuroligin-1
KO
K07378
neuroligin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecule (CAM) interaction
tben04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117490917 (nlgn1)
04517 IgSF CAM signaling
117490917 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117490917 (nlgn1)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117490917 (nlgn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
117490917
NCBI-ProteinID:
XP_033996583
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MSQWRHQSRTGCQLLLTAKSGSRMMGYISLEGSLLSGRWVSSLIWLGLLLLQTSLAEKLD
ENDPVVTTVYGRLRGVKKELNNEILGPVVQFLGVPYASPPTGERRFQPPEPPASWPEIRN
ATHFAPVCPQSIVEGRLPDVMLPVWFTNSIDVVSTYVQDQSEDCLFVNIYVPTEDGPLTK
KHTDDLGDSDRTDDEDIRESGSPKPVMVFIHGGSYMEGTGNMFDGSILASYGNVIVMTVN
YRLGVLGFLSTGDQAAKGNYGLLDQIQALRWTSENIAAFGGDPLRITVFGSGAGASCVNL
LTLSHYSEGNRWSNSTKGLFQRAIAMSGTALSSWAVSFQPAKYARMLARKVGCNLEDTVE
LVSCLQRKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQ
GEGLKFVELIVDNENGVQANDFDYAVSSFVDDLYGYPEGKDILRETIKFMYTDWADRHNP
ETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTEQVPPWADAAHGDEI
PYVFGLPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNR
FEEVAWTRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHSLNDVTQLIPTTTKI
PSPESTNRPPKTKPMVTKRPNPTPFPTETQDSHIQPHLVDQRDYSTELSVTIAVGASLLF
LNILAFAALYYKKDKRRHDVHRRCSPQRSATNDLAHTQEEEIMSLQMKQHSDLDCRGVGD
SLHPHDVGLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPSTMGGLTSLHSFNTFPSSGQ
NNTLPHPHPHSHSTTRV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtggaggcaccagtcaaggactgggtgtcagctacttctgactgctaagagt
gggagcaggatgatgggatacataagccttgaaggttctttgctcagtggccggtgggtg
tcctctctaatatggcttggactgctgctgctacagacgtctctggctgagaaacttgac
gagaacgacccagttgtgacaaccgtgtatggcaggctgcgtggtgtcaagaaggagctt
aacaacgagatcctgggtcccgtggtgcagtttctaggagtcccgtacgcctctccgccc
accggcgagcgtcgctttcagccacctgagccgccggcgtcgtggccggagatccgcaac
gccacacactttgccccggtgtgccctcagagcatcgtggagggccgcctgcctgacgtc
atgctgccggtttggtttaccaacagcattgacgttgtctccacgtacgtccaggaccag
agcgaggactgcctctttgtcaacatctacgtccccactgaggatggtccccttacaaag
aaacacactgatgatttaggtgatagtgaccgcacggacgacgaagacattagggagagt
ggaagccccaagccggtgatggttttcatccatgggggctcctacatggaaggaacaggg
aatatgtttgacggcagcatcctggccagctatggaaatgtgattgtcatgactgtcaac
taccggctgggcgtcctaggcttcctgagtacaggtgaccaggcagccaaggggaattac
ggtttgctggaccagatccaggctctgcgttggaccagtgaaaacattgcagccttcggc
ggcgacccgttacgtatcaccgtgtttggctctggcgccggagcttcctgtgtcaacctg
ctcactctgtctcactactccgagggaaaccgctggagcaactccaccaaaggactgttc
cagagggccatcgccatgagtggcacggctctgtccagctgggcggtcagctttcagcca
gccaagtacgcccggatgctggcccgtaaggtgggctgtaacctggaggacactgtggag
cttgtgagctgcctgcagagaaaacattacaaagagctggtggatcaagacatccagccg
gctcgctaccacatcgcctttggacctgtcattgatggagatgttatacctgatgacccg
cagatactcatggagcaaggtgagttcctgaactatgatattatgctgggagtaaaccag
ggcgagggccttaagttcgtggagcttatcgtggacaacgaaaacggcgttcaggcaaac
gactttgactacgccgtgtccagttttgtggatgacctctatggctacccagagggtaaa
gacatcctcagagagaccatcaagttcatgtacacagactgggccgacaggcacaaccca
gagacccgccggaaaacactgctggcccttttcaccgaccaccagtgggtggcgccagct
gttgccacagctgacctgcactccagctttggatcaccaacatacttctatgccttctac
caccactgtcagacagaacaggtaccgccgtgggcagacgcagcacatggagatgagatt
ccgtatgtatttggcctaccgatgatcgggccaacagagctgtttccctgcaacttctcc
aagaacgacgtgatgctcagcgccgtggtcatgacctactggaccaacttcgccaaaaca
ggggatccaaaccaacctgtcccccaggatactaaattcatccacaccaagcccaatcgc
tttgaagaggtggcatggacacgctacaaccagaaagaccagctttacctccacatcggc
ctgaagccccgcgtcaaagagcattaccgtgccaataaggtcaacttgtggttggagctg
gttcctcatctgcacagcctcaatgatgtcacccagctcatccccaccaccaccaagatc
ccttcaccggagtctaccaaccgccccccgaagaccaagcctatggtgaccaagcgcccc
aacccgactccgttcccaaccgagacccaggacagccacatccagccacacctggtggac
cagcgtgactactccaccgagctgtcggtgaccatcgctgtaggagcttccctcctcttc
ctcaacattctcgcattcgctgcgctctactacaagaaggacaagcgtcggcacgacgtc
cacaggcgctgcagcccccagcggagcgccaccaacgacctggctcacacccaggaggag
gagatcatgtccctgcagatgaagcagcactcggacctggactgcaggggcgtgggcgac
tccctgcacccgcacgacgtggggctgaggactgcgtgtccgccagactacactctggcc
atgagacgctcaccggacgacatcccgctcatgacgccaaacaccataaccatgatcccg
agcaccatgggggggctcacctcgctccactctttcaacaccttccccagcagtgggcag
aataacaccctgccccatccgcacccacactcacattccacaacccgggtatag
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