Trematomus bernacchii (emerald rockcod): 117490935
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Entry
117490935 CDS
T09643
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117490935 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117490935 (neil3)
Enzymes [BR:
tben01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117490935 (neil3)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117490935 (neil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117490935
NCBI-ProteinID:
XP_033996612
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MVEGPGVTLNGEKIRAKVQKGQKIKEIKGSLTTSTKHNSGGNAFQRFHGCSDTGVETLGK
ELFMYFGAKALRIHFGMNGSMRLNPAVRKERTGSVPVLEVHLTNDTVCFFDSTVEIRLTE
DCEQRVRAMESLDVCSPKFSFSRSEEAVRSQSSRILCDVLLDQAVMPGVGNIIKNEALFD
SGLHPAVKVKQLTDEQIHHLVKMTRDFTLLFYKCRKSGSPLYKHYKVYKRPQCGQCSRAI
TVCRLGDNGRMTYFCESCQTGDPSQVELSKLPVRNSLIGWVSNERTNDCVAKKEEEDWAC
QLCTLINQPTAKSCDACFTPKPEVHKDGTNTEATPFTTDLIKYPCNAFTKPQEELKVNWR
SAFGTSTLVFSDLSKKTKPANSPLSSAGSHLNSLPAERGLYKYSVCQGTTSPNYASGGWQ
RKSGELSNGESLASYSHPSKKMRIDHSPFPSNNAQNGAPNPSKRKVEATGRSPSTSSSPS
APCCASHSRPAVLRAVHKEGENKGRQFYSCSLPRETKCNFFEWADTHFPSCQHGKRCLMR
TVLKLGPNNGRNFYTCSLQKGKQCEFFKWAEKGPGISILPGC
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggtccgggggttacattaaacggagagaaaatccgtgcaaaagttcaaaaa
ggacaaaagattaaggaaatcaaaggcagtttgacaacatccaccaaacataactccggg
ggaaatgccttccagaggtttcatggttgttcggacaccggggttgaaacgcttggcaag
gagctcttcatgtacttcggtgcaaaagctttgagaatccactttggtatgaatggatca
atgcgtctaaaccctgccgtgaggaaggagaggactggctccgtacccgtgctggaagta
cacttgactaacgacactgtgtgcttctttgacagcactgtggaaataaggttgactgag
gactgtgagcagagggtgagggctatggagagtctggatgtgtgctctccaaagttcagc
ttctcccgctccgaggaggcagtgaggagccaaagtagcagaatactctgtgacgttctc
ctagaccaagccgtcatgccgggagttggcaacatcattaaaaacgaagccctgtttgac
tcgggcctccatccagccgtgaaggttaaacagctgacagacgagcagatccaccacttg
gtcaagatgacacgggatttcactcttctgttttacaagtgtcgcaaatctggctctcct
ctgtacaaacattacaaagtctacaagcgtccccagtgcggccagtgctctcgagccatc
acggtctgtcgtcttggagacaacggcaggatgacttacttctgcgagagctgtcagacg
ggtgatcccagccaggttgagctcagtaagctcccggtcagaaacagtttgattggctgg
gtctccaatgagagaaccaatgattgcgtggctaaaaaggaggaagaggactgggcctgt
cagctgtgcacgctcatcaaccagccgacggccaagtcctgtgacgcctgcttcactccc
aaacctgaggtccacaaagatggcactaacactgaggcaacacccttcaccactgatttg
attaaatacccctgcaatgccttcacaaagccacaagaggagctcaaagtcaactggagg
tctgcattcgggacttccacccttgttttctctgacttgagcaagaagacaaagcctgca
aactcccctctctcttcagccgggagtcatttgaattccttgccggcagagcggggttta
tataaatacagcgtctgccaggggacaacaagccccaattatgcctctggtggctggcag
aggaaaagtggcgagctctccaacggggagtcgctggcctcctacagtcacccatccaag
aaaatgagaattgatcacagtccctttcccagtaacaatgctcaaaatggggcccccaac
ccgagtaagcgtaaagtagaagcgacaggccgcagcccttccacttcttccagtcccagc
gccccttgttgtgcatcccacagtcgtccagccgtcctcagagcggtccacaaggagggg
gagaataagggacgacagttttactcctgctcgttgcccagggagaccaagtgcaacttc
tttgagtgggctgacacacacttcccctcctgtcagcacgggaagcgctgcttaatgagg
acggttctgaagctgggaccaaacaacggccgcaacttctacacctgcagcctgcagaaa
gggaagcagtgtgaattcttcaagtgggcagagaagggaccggggatatccatcctccct
ggttgttaa
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