Trematomus bernacchii (emerald rockcod): 117490984
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Entry
117490984 CDS
T09643
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117490984 (lingo2)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117490984 (lingo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
ig
Ig_2
LRR_14
LRR_EndoS
V-set
LRR_LRWD1
LRR_6
LRR_9
C2-set_2
LRR_RPS2
C2-set_3
Ig_6
Motif
Other DBs
NCBI-GeneID:
117490984
NCBI-ProteinID:
XP_033996675
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MVDGMSRVMLHTVVSCWQPFLGLALVAVFAGATLGCPSRCECSAQTKAVVCHRKRMPTIP
DGIPTETRILDLSKNKMTMINPDDFFAFPGLEELDLSGNIISYVEPGAFNALFTMHSLSL
KSNRIKLIPLGVFTGLTNLTRLDISDNKIVILLDYMFQDLHNLRFLEVGDNDLVYISHRA
FSGLLGLEMLTLQRCNLTVVPTEALSHLHNLVSLHLRYLSISTLHPYSFKKLFRLRHLEI
DNWPSLDHVPANTLHGLNLTTLSMTNTNMSSFPYQALKHLPYLTHLNLSFNRIRHIEGAM
LMELVRLKELHLVGAQLTTIEPYAFQGLRGLQVLNVSHNRLDTLEKGVFQSPEALEALLI
DNNPLVCDCRLMWLLQKRPSIFYGDLQPECSTPEGNRGRPFQEFKDTLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLRCSAEGKPKPVVSWMSPRRRVLTSRSHGRVTVHDNGTLEIKS
AEVQDGGVYLCLASNSAGNDTLMTSLAVKSLGSLYANRTQHYTDPSNSTANGTAGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDSAE
GQAGGRRFNMKMM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacggtatgagcagagtcatgctgcacacggtcgtctcatgctggcaacccttc
ctgggactggccctcgtggctgtcttcgcgggtgccactctgggatgtccatcccgctgc
gagtgttcggcgcagaccaaggcagtcgtctgccaccgcaagcgcatgcctaccatcccg
gacggcatccccaccgaaaccaggatcctggacctgagtaagaacaagatgacaatgatc
aaccctgatgacttttttgcctttcctgggcttgaggaacttgacctcagtggaaatatt
atcagttatgttgagcctggggcttttaatgccctgtttaccatgcactctctcagtctc
aagagcaatcgaatcaagctcattcctctgggcgtcttcacaggcttgacaaatcttacc
cgactggatataagtgacaacaaaatcgtcatccttctggattacatgtttcaggacttg
cacaatctgaggtttttggaagtgggtgacaacgatctggtttacatttctcaccgtgca
ttcagtggacttttaggcctggagatgctaaccttacagaggtgcaaccttactgttgta
cccactgaggccctttcccacctgcacaacctggtcagtctccatctacgatacctcagc
atcagcactttgcatccctactcgttcaaaaagctgttccggctgcggcatttagagatt
gataattggccatccctagaccatgtgccagccaataccctgcatggcctcaacctgacc
actctgtccatgaccaacaccaacatgtcctctttcccttaccaggccctgaagcatctg
ccctacctgacccacctcaacctgtccttcaaccgcattaggcacattgaaggtgctatg
ctgatggagctggttcggcttaaagagctccatctggttggagctcagctaaccaccatt
gaaccgtatgccttccagggcctgcgggggctccaagtcctcaatgtctctcacaaccga
ctggatacactggagaaaggtgtttttcagtctcctgaggccctggaggctcttttgatt
gacaacaaccccttggtgtgcgactgtcgtctcatgtggctcctacagaaaaggccctcc
atcttctatggggacctgcaaccggagtgcagcacgcctgaaggtaatcgtggcagacct
ttccaggagtttaaggacacgctcctgtcttattacgtgacatgtaccaagccaaaaatc
cgtgagaataaaacacaaaccatcacagtggatgagggccagcaggccatgttgcgttgc
agtgctgaagggaaacccaagcccgttgtgtcctggatgtccccacggcgacgagtcctg
acaagcaggagccatggaagagtcaccgtccacgacaatggtactctggagatcaagtca
gcggaggtgcaagatggcggagtctatctttgcctcgcctccaacagtgctgggaatgac
accctgatgacatccttggcggtgaaaagcctgggatcgctgtacgctaacaggacccag
cactacacagatcccagcaacagcactgccaacgggacggccggtgtgaccctcggtttg
gacctaaagactattttagtgtccactgcaatgggttgtttcacattcctgggagtggtc
ttgttttgtttcctgctccttttcgtttggagcagagggaaaggaaaacataaaaacaac
atagatgttgaatatgtgcctcggtcaaagtctaatggcactaacgttgactcggcagag
ggacaagctggtggtcgtcgttttaacatgaaaatgatgtga
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