Trematomus bernacchii (emerald rockcod): 117491003
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Entry
117491003 CDS
T09643
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117491003 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117491003 (pitx2)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117491003 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117491003
NCBI-ProteinID:
XP_033996704
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MNSMRDPLNTDHHHLTGNKLASTHHTALAMASTLQPLQRSVDSKHRLEVHTVSDTSSPES
VGKNRLGGADVCSKAPQMSSRYQTKEKEKNQNKNDDSSDDPKKKRQRRQRTHFTSQQLQE
LEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKSGFGPQ
FNGLMQPYEDMYPSYTYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQNMFSPPNSISS
MTSSMVPSAVTGVPGSSLNSLNNLNNLSNPSLNSGVPTSACPYAPPTPPYVYRDTCNSSL
ASLRLKAKQHSSFGYVQNPAANLSACQYAVDRPV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgagggatcctttaaacacagaccatcaccaccttacagggaataaactt
gcctccacgcaccacacggctctggcgatggcctctactttacagccgctgcagcggtct
gtggactctaaacaccggttagaggtgcacactgtgtcggacacgtccagtccggagtct
gtcggtaagaaccgcttggggggggcagatgtttgcagcaaggcgccgcagatgtcatct
cgatatcaaacaaaagaaaaagaaaagaaccaaaataaaaacgacgactcttcagatgac
ccaaaaaagaagcggcagcggcggcagaggactcacttcaccagccagcagctgcaggag
ctcgaggccactttccagcggaatcgctacccggacatgagcacgagggaggagatagcc
gtgtggaccaacctcacagaggcccgggtcagggtttggttcaagaaccggcgagccaag
tggaggaaacgggaaagaaaccaacaagccgagctctgcaaaagcggcttcggcccgcag
ttcaatggactcatgcagccctacgaagacatgtacccgagctacacgtacaacaactgg
gccgccaagggcctcacgtcggcgtctttatctaccaaaagcttccctttcttcaactcc
atgaatgtcaaccccttatcctcgcagaacatgttctcgccgcccaactccatatcctcc
atgacttccagcatggttccttcggcggtgaccggggtgccgggctccagcctcaacagc
ctgaataacttgaacaacctcagtaacccgtccctcaactcgggggtgcccacctcggcg
tgcccctacgcgcctccgacccccccttatgtgtacagggacacttgtaactccagcctg
gccagcctgagactgaaagccaagcagcactcgagttttggatacgtgcagaatccggcc
gctaatctgagcgcctgccagtacgccgtggacagaccagtctaa
DBGET
integrated database retrieval system
