Trematomus bernacchii (emerald rockcod): 117491039
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Entry
117491039 CDS
T09643
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117491039 (sned1)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117491039 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_CA
EGF_2
EGF_3
cEGF
EGF_MSP1_1
MAGP
SdrD_B
EGF_DL_JAG
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117491039
NCBI-ProteinID:
XP_033996750
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVLVLQALLPCFCTLLSLELLPGVEPAVPLEDFYPFGQDVGDSQTIAQDDGGSRLVKISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQEPSSLRRASGEVKTYFSEFPNFNATWVLIATWHQVTFFGGSSLTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSRTADVVN
VEGTTNVGQPGKWVFRIDDANVEVGSCNDSASVCQHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGQRCQIDVDECASYPCQNGGTCADRINSFLCHCPPGYTGSQCEADIDECKDRPC
LNDAMCVQGAGTFTCVCEPGYTGVLCETDMNECESQPCLNGGECMDLVANFTCVCPAAFT
GTLCETELVVLQVNSTEPENQTGLCGNANCEKNWICENTSSGIHICTCAPGFYGDECEEE
CLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSHSRTCPDGGPCLEYGGAYLCTCQ
TSAAELDHKDFYPYVQPRSVCDSSPCLNGGYCYERDGGFTCECKYGYWGKHCEKVRLNTC
ASAPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCE
CTEHFGGRHCEINRSSVQTSAELGCGLPPPVKHAEVQFSSTTPGSMAVYMCHSGFTSVPR
ATQSICGIQGDWSQPPICEEINECLSQPCLNGGTCGNQVGSYQCECDEGFSGNRCQTDIN
ECLSGPCEHGGTCEDQPGSYLCHCSQGFKGHNCEIEQHGCESNPCLNGGVCRGYRRNYLC
VCKDGFFGDQCQMLENPCVLQPCGNRGLCRSDKRGNYNCVCRVGHTGKDCEKDLLPPSGL
HVLRVEENEVELRWDQPEPEHSLISGFVVTYAPLGWSNPKTDTLERQQSSHIMRGLLPGL
LYNISTFSIKRNTNSNDNSQPATALIRTRPPRVEQLQVGNVSSSQVWLSWLVQAARHAAV
SRVLVSLLPADGSQARTAVLNTSSTEHSFSALLPGQMYTVDVLTQSGIRPDEFPSTSHSA
GPLQFWTRPLPPQNLSLSHVTTNSALITWSRYPRNVPDGFVVNVTRGLNTRSRFLPNGKL
GSYTLRELTPGQQYHVAVTSVKSTAQEQIHSVPQHLAFTTLPIGEISERRKRPAGNGQGA
HVGHTLPPSQPQDLGATTETENSKALPRYTELIDRRGKITAKFTHFPRKAVRHRTKPDPP
IKLEKMEETTNKISLALEIEEGLRTKPELQQDCRSVPCHNGGTCVSGADSFLCDCAAGFK
GRQCELLCQRVPHPCTRLYSETKSVPVWEDGVCHYLYKRTYKVQQDVCYREICEPTPPKI
SQSRRTSRQQ
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcaagccctgctgccctgcttctgcaccctgctctccctggaactg
ctgcctggggtggaacccgccgtgcccctggaggacttctacccctttggccaggacgtg
ggggactcccagaccatcgcgcaggacgacggaggctcccggctcgtgaagatctctgtt
gctttccccttctttggagacaggcacacaggactctatgtcaacaacaatggccttgta
tctttcctgagggaggtgtcccagttcactcctgtagcatttccgatcgcgggggacaga
agggttgtggcgccattctgggcagatgtggataaccgtcgagcagggagagtgttctat
agagagagccaggagccctccagcctgaggagggcctcaggggaagtcaagacgtacttt
tcagagttccccaacttcaatgcaacatgggtcctcatcgctacatggcaccaagtgact
ttctttggaggcagctctctcacaccggtaaatactttccaagtggtgctcattacagac
ggagagctttccttcactatattccagtacaataacatcacttggaccacaggcatgcat
gccagcagtggaggaaacctggctgggctgggagggattgcagcacaggcaggtttcaat
gctggtgatggtaagcgctatttcaacattcccggttctcgcactgctgatgtggtaaat
gtcgagggaaccactaacgtgggccaaccgggcaaatgggtctttcgtatcgatgatgca
aatgtggaagttggtagctgcaatgactctgcatcagtgtgccagcacctgcgaccttgc
ctgaatggaggccagtgcatagacgactgcattacaggaaacccctccttcacttgctcc
tgcttggctggcttcaccgggcaaagatgccagattgatgttgatgagtgtgcctcatat
ccgtgccagaacggagggacttgtgcagaccggattaatagtttcctctgtcactgtcct
cctggatacacagggagtcagtgtgaagcagacattgacgagtgcaaagacagaccatgc
ctcaacgacgcgatgtgtgtgcagggcgctggcactttcacctgtgtgtgtgaacctggt
tacactggtgtcctctgtgagacagatatgaacgaatgtgagtcacagccgtgtctgaat
ggaggagagtgcatggatctggtggccaacttcacctgtgtttgccccgctgccttcact
ggaacactctgtgaaacagaactggtggtgcttcaggttaattcaaccgagccagaaaac
caaacaggcttatgtggcaatgcaaattgtgaaaagaactggatttgtgaaaacactagc
tcgggaatccacatctgcacatgtgctccaggcttctacggggacgagtgtgaagaggaa
tgtctgtgccagaatgggggtgtgtgtgtggatatcaatgggacttgtgaatgcccgtca
ggctacacaggactctactgtcagtttgaagtaactcagacgccgtgcagccacagcagg
acgtgtcctgatggaggtccctgtttggagtacggaggagcctacctgtgcacatgtcag
accagtgcagcagagctggatcataaggacttctacccctatgtacagccccgatcggtc
tgtgactcctccccgtgtctgaatggaggatactgctacgagcgggatggaggcttcacc
tgcgagtgcaaatacggatactgggggaagcactgtgagaaagtcagactcaatacctgt
gcttctgctccctgccgcaacggaggctcctgcaaggaggaagcagggagctacagatgt
gtgtgtccttacagattcactgggaaacattgtgaagtggggaagccagacccctgtgcc
tccagcccctgtctgaatggggggacatgtttccactacataggaaagtacaaatgtgaa
tgcactgaacactttggtggcaggcactgtgaaataaacaggagctcagtacagaccagc
gcagagctgggctgtgggctgcctccaccggtgaagcacgcagaggttcagttctcctca
acaacaccgggctccatggctgtgtacatgtgccactcaggcttcacctccgtgcccaga
gccacccagagcatctgtggtattcagggagactggagccagccccccatctgtgaggag
atcaatgaatgcctctcacagccttgtcttaatggcggtacatgtgggaaccaggtgggc
tcctaccagtgtgagtgtgatgagggcttcagtggaaaccgctgtcagacagatataaat
gaatgcctgtcggggccctgcgagcacggggggacatgtgaagaccagcctggctcctac
ctgtgtcactgttctcaaggcttcaaaggccacaactgtgaaatagagcagcacgggtgt
gagtccaatccctgtctgaatggaggcgtgtgccgggggtacagacggaattatttgtgt
gtgtgcaaagacggcttctttggggaccagtgccagatgttggagaacccatgtgtactg
caaccttgtggaaaccgtggcctctgcaggagtgacaagagagggaactacaactgtgtg
tgcagagtgggacacacaggcaaagactgtgagaaagacctgttgcctccctctggtctc
catgtgctgcgtgtggaggagaacgaggtggagctacgctgggatcagccggagccggag
cacagcctgatcagcggcttcgtggtcacgtatgctccgctgggctggagtaatccaaaa
acagacacgctggagaggcagcagtcctcccacatcatgagaggcctactgcccggcctg
ctgtacaacatctccaccttctccatcaaacgcaacaccaacagcaacgacaacagccaa
ccagccacggctctgatacgcaccagacccccgcgggtggagcagctgcaggttgggaac
gtgtcctcctcacaggtgtggctgagctggctggtgcaggctgctcgtcacgcagcagtc
agcagggtgctggtgtctctgctgcctgcagacggcagccaggctcgaactgccgtgctc
aataccagcagcacggagcactccttcagtgcattactccctggtcagatgtacacggtg
gatgtgttgactcaaagtggaatcagaccggatgaatttccctccaccagccactcagct
ggacccctgcagttctggacacggcctctccccccacagaacctctccctgtcacatgtg
accactaactcagcactgatcacctggagccgctacccgagaaacgtcccagatggcttt
gtggtcaacgtgacccgagggttgaacacgaggagtcgcttcctgcccaatgggaagctg
ggatcatataccctgcgtgaactgactccaggacagcagtaccatgtggctgtcacgtcg
gtgaaaagcacagcgcaggaacagatccacagtgtaccccaacacctagcctttactacc
ttgccaataggtgaaatatcagagagaagaaagaggccagccgggaatggacagggggct
catgtgggacacacacttcccccatctcagccccaggacctgggggccacaacagaaaca
gagaactcaaaagcactgcctagatacacagagctcattgacagaaggggaaagataaca
gctaagtttactcactttcctcgaaaagccgttcgacatcgcaccaaacctgacccgcca
attaaattagagaagatggaagaaacaacaaacaaaatcagcctggcactcgagattgaa
gaaggtttaagaacgaagcctgaactgcaacaggactgccgcagtgtgccttgccacaac
gggggaacatgtgtgagcggagcagactcgttcctctgcgactgcgcagccgggttcaag
ggccggcagtgtgaactgttgtgccagagagtgcctcacccctgcacccgcctgtactct
gagaccaagagtgtgcctgtgtgggaggacggagtgtgccactacctgtacaaaaggacg
tataaagtacagcaggatgtttgttatcgagagatttgtgaacctacgcctccaaagata
agtcagagcagaagaacaagcagacaacaataa
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