Trematomus bernacchii (emerald rockcod): 117491100
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Entry
117491100 CDS
T09643
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117491100 (lrrk1)
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117491100 (lrrk1)
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: TKL group
LRRK family
117491100 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
Roc
COR-B
COR-A
Ank_2
LRR_14
Beta-prop_LRRK2
Arf
Ank_5
Drf_DAD
DUF6115
TFIIA
Motif
Other DBs
NCBI-GeneID:
117491100
NCBI-ProteinID:
XP_033996841
LinkDB
All DBs
Position
Unknown
AA seq
2022 aa
AA seq
DB search
MSYWSVGLPQDTADALSNMEQQSGPGEEMGAKASLVEGPGPGSAMVTSPTLDNIRAAYEE
GENEAARELIQQACCVECSAAVPHIDGVGLLCVASQHGDLQSVSYLLREARIILPQEPSS
SNPAILAAYYGHASVVKELLDSIPGPCLRRDLLNFMLATSCQQGQLDVVRLLVHGYAADT
KDCAVHSDEFAVITGLPLYAAAQAGNEEISCFLLQNGAGFSSYTLMDHPAFSKHLLRLKL
QETTNTEGDKAVSVCWSGLQLPWLELDWFMDVSSRIAHLDLSSNSLGALPSVVPWGLIGL
QTLDLSSNLLKELPAAASSQQVLCSRLQHINLSQNQLSSLPPGLLHLTHIQRISAAKNQL
TDLFDIPSTTNWIGLRKLEELDVSDNCLSSLPTAVLHCLKSLILLNVCRNKLSRFPEPWA
CPLKQCNASSNVIENLPNTISMSWRTQLQEVDFSDNSLKELPSYLFELEALVSLRLCGNH
IDTLPAPSKWKCSRLRTLDLSRNQLGRTEEGPKSRKLAFLTTWNRRDPEPVCSIEFPMIL
RDSLEVLFLNDNQLECVPQSVCGLHSLTELYLSNNPRIRELPAELSQLYNLWQLDTEDLN
ITNVPQDVRKEGPASVLAFLRAYLRKAAPCKLLKMLVIGPPRQGKTSLLEALQTGEAAPF
TPAECSISISTWELDNPNGDKSSRDSVAFNVWDIGGPASMSTVTQCFFTDKALYVVIWNL
ALGEEAVANLQTWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERLATLRAYILALCRSPS
GARASGYPDITWKHLHEVSCRTREGLEALKKLLFQVSRSMRDSSSSSACGSRLLGRLIPK
SYLTLQDAVLAEKQRRDAEGEVQYITEAQLEHILKQNPERDIRDYEDRQTAISFLIETGA
LLHFPDTSHGLCILYFLCPVWLSECLERIMHLKSSRSVARNGVIRTEDLRMLLVGTGFTE
QTEEQYFQFLAKFEIALPVANNSYLLPHLLPPKPAMDIHGLRQQTHNTLQRLVRMSFVPA
GFWERFIARMLISLTEMDLQSFEPKRNTRSQCSRNSVIYSFAGTQQRNRCSTFRVRRSQT
IYWKEGLLVTFDGGYLSVESSDVNWKRKKSGGIKIICHSESRDFSAMAFITDNVNSLIDQ
WFPALTASESDGSLLMEQYSPCPLCASLGPQKQAKLVGQVGEEGAWGAGEGADGAGGAGL
HYFNMEDCVLAAVEKEHILCPQHPEHPVSLQELVPELFMTDFPSRLFMDSAQLEYSEEEK
NILGQGGSGTTIYRARYREQPVAIKRFHFKKCRQQASSSDTDTMLKHLQSADACRSFSEF
RQEASMLHSLLHPCIVSLLGISIHPLCFALQLAPLGSLNTVLEEKRKGSRYMPLGHMLTF
RVAYQIATGLAYLHRKSIIFCDLKSDNILVWSLEVQDPVNIKLSDYGISRQTFHEGALGV
EGTPGYQAPEIRPGIVYDEKVDMFSYGMVLYELLSGQRPRLGHHQLQIAKKLSKGIRPLL
GSPEEVQFCCLHSLLTECWDTKPEKRPVALQCVRRMQEPSFPCLRYLLLAGSHSQLFLSP
LQGHSAVFWDGDKDSRSYSVVNVEKGQVEVKRMSCAGSRVCCQMKMGNILWMATEEQEIF
IYSLKDMCPLSQPQKHFSCPAIITCLLPVPAQEQSLARVFAGMSDGLVAVYSLLEDLPLE
GEIYLCSHTLNRTLFALKDSDPRQRPYPVSSMVLVSRGSQLWLSNGPGVLVIDCLSLQAV
RRLDPYSPPSSIVSMTTSFSLWGEEAVWTLDDHANTLLLYHATSYQLCAHYSCGDSHPLR
DVFSVQRPAAVTTVTTTEFKATAKENMLKRTDGEVTLMYSEEAGTQILQQQDSLTDYNPL
QSTQQDQQQDQQQDQQQDQQQDQQQVQDQQQDQQQVQDQQQDSAESVRPSEPRLQAFTLL
EVSRTLWIPRRGGDVMVIELQSHGDELRGRVTAVLTPPGRSSLGTLMEAAIVAKDTVVCG
FQKENMEWCLCVWRGWGCRELEVFYRSYEELGRLESSMRRRR
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgtcatactggtctgttggccttccccaggatactgcagacgctctcagcaacatggag
caacaaagcggccctggggaggaaatgggagccaaggcatcgttggtggaaggtccgggt
cctgggtctgctatggtaacttctcccactctggacaacatccgggcagcctatgaagaa
ggagagaatgaggctgccagggagctgatccaacaggcctgctgtgtagagtgcagcgca
gcggtgcctcacatcgatggggttggtcttctttgtgttgcctctcagcatggtgatctg
cagagtgtctcttacctcctgagagaagcccgtatcattttacctcaggaaccatccagc
agcaacccagccatcctggcagcgtactacggccacgccagcgtggtcaaagagctgctg
gactccatccctggtccatgtctgaggagagacttgttgaactttatgctggcgacatcc
tgccagcaaggtcagctggacgtggtgcggctgctggtccacggctacgctgctgacacc
aaggactgtgccgtacacagcgatgagttcgctgtcattacggggctgccactgtatgct
gctgcacaagcaggtaatgaggagatatcttgcttcctgctgcagaacggggcggggttt
tcctcatacaccctgatggaccacccagccttcagcaaacacctccttagactcaaacta
caggaaaccacgaacacagaaggagacaaggcagtgtctgtgtgctggagcggtctgcag
ctgccctggttggagctcgattggttcatggatgtctcctcacgtatcgcccacctagat
ctgtcctccaacagccttggggctttgccctccgtggtgccctggggtctcatcggcctg
cagactctagatctttccagcaatcttctgaaggagctgccagctgctgccagctcccag
caggtcctctgctccaggttacagcacatcaatctctcccagaaccagctcagcagtctg
ccgcccggactcctccatctgacccacatccagagaatttctgctgctaagaaccagctc
acagacctgtttgacattccttccaccactaactggattggtctgcgtaagctggaggag
ctggatgtgtctgataattgtctcagcagcctgcccacagcagtcctgcactgtctgaag
tccctgatcctgctcaatgtgtgcaggaacaaactgagccgcttcccggagccctgggcc
tgtcctctgaagcaatgcaacgcttcctccaatgtcattgagaatcttccaaacaccatc
tccatgtcctggaggacgcagctgcaggaggtggacttctctgacaacagcctgaaggag
ttgccctcatatctctttgaactggaggctctagtgtcgttgagattgtgtgggaatcac
attgacacactccctgcccccagtaagtggaagtgctctcggctcaggaccctggatcta
tccaggaaccagctgggcagaacagaggaggggcccaaatccaggaagctggccttcctg
acaacctggaacaggagggacccagagccagtgtgttccatagagtttcccatgattctg
cgggactcactggaagtgcttttcttgaatgataaccagctggagtgtgttccccagtca
gtgtgtggtctgcacagcctcactgagctctacctctccaataatccaagaatccgggag
cttcctgcagagctcagtcaactgtacaacctgtggcagctggacactgaagacctcaac
attactaatgtcccccaggacgtcagaaaagaaggtcctgcgtctgtcctggctttcctc
cgggcataccttcggaaggcggccccttgtaaactgctgaagatgcttgtgattggtcca
ccgagacaggggaagacatcccttctggaggctttacagaccggcgaggcggcccccttc
acccccgcagaatgcagcatctccatctccacctgggagctggacaaccccaatggagac
aagagcagtagggactctgtggcgttcaatgtgtgggacatcgggggtccagccagcatg
tccacagtgacccagtgtttcttcactgacaaggccctgtacgtagtgatctggaacctg
gctctgggagaggaggctgtagccaacctgcagacatggctgctcaacatagaggcgcga
gcacccaactctgcggtggtggtggtgggaacacatctggatctcatcgacaccaagttt
cgcaccgagagactggccactctgagagcttacattctggctctatgccgatccccgtca
ggggcccgagcttccggataccccgacatcacctggaaacacctgcatgaggtgtcctgt
aggactcgggagggcttggaggctttgaagaagctgctcttccaggtgtctcgctccatg
agggacagcagcagcagctcggcctgtggcagcaggctgctgggcagactgatccccaag
agctacctgacccttcaggatgcagtgctagcagagaagcagcggcgggatgctgaagga
gaggtccaatacatcactgaggcccagctggagcacatcctcaaacagaacccagaaagg
gacatcagagactatgaggaccgtcagactgccatcagcttcttgatagagacaggggcc
ctgctgcacttcccggacactagccacggcctgtgcatcctctacttcctgtgtcctgtg
tggctgtcagaatgcctggagaggatcatgcacctcaagtcctctcgctctgtagccagg
aatggagtgatcagaactgaagaccttaggatgctgttggtaggaacaggtttcaccgag
cagacagaggaacagtatttccagtttctggccaagtttgagattgctcttcctgtggcc
aacaacagctatctgctcccccacttacttccccccaagccagctatggacatccacggc
cttcgccagcagacccacaacaccctgcagcgcctcgtcaggatgagctttgttcctgct
ggattttgggagcgctttatagccaggatgctcattagcctcacagagatggacctgcag
tcttttgagcccaaaagaaacaccaggagccagtgcagcaggaactctgtgatctacagt
tttgctggaacccagcagaggaaccggtgcagcaccttcagagtcagacgcagccagacc
atatactggaaggaggggctgctggtcacttttgatggaggctacctcagtgtggagtca
tcagatgttaactggaagaggaagaagagtggagggataaagatcatctgccattcagag
agcagagacttctctgccatggctttcatcacggacaacgtgaactctctgatcgatcag
tggttccccgctctgaccgccagtgagagtgacgggagtctcctcatggagcagtactct
ccctgtcccctctgtgcctcactgggcccgcagaagcaagccaagcttgtaggtcaggtg
ggagaagagggagcatggggagcaggggagggggctgatggcgcaggaggggcagggctt
cattacttcaacatggaggactgtgttctggctgcagtggagaaggagcacatcctctgt
cctcagcaccctgagcacccagtcagcctgcaggaactggtcccagaactcttcatgact
gacttcccttcacggctgtttatggacagtgcccagctggagtactctgaggaggagaag
aacatccttggccagggtggcagcgggactaccatctaccgagcccggtatcgtgagcag
ccggtggcaatcaaacgcttccacttcaagaagtgtcgtcagcaggcctccagcagtgat
acagacaccatgctgaaacacctgcagtctgcagatgcctgtcggagcttctctgagttt
cgccaggaggccagtatgttgcactctctgctgcatccctgcatcgtctctctgctgggc
atcagcatccaccccctgtgcttcgcattgcagttagcccccctgggcagcctgaacact
gtgctggaggagaagcgcaaaggctccagatacatgcccctcggtcacatgctaactttt
agagtagcctatcagattgccacaggactggcataccttcacaggaagagcatcatcttc
tgtgacctcaaatctgacaacatcctggtgtggtctctggaggttcaagatccggttaac
attaaactttctgactatggcatttctcgacaaaccttccatgagggagccttgggggtc
gagggcacaccgggttaccaggctcctgagatccgaccgggcatcgtatacgatgagaag
gtggacatgttctcctatggtatggtgctgtatgagctgctctctgggcagaggccacgg
ctgggacaccaccagcttcagatcgcaaagaagctctccaaaggcatccggccgctgctg
ggcagcccagaggaggtccagttctgctgcctccacagcctgctgactgagtgctgggac
accaagcctgagaagaggccggtggccctgcagtgtgtgaggcggatgcaggagcccagc
ttcccctgcctccggtacctcctgctggccggcagccactcgcagctcttcctctcgccg
ctgcagggacacagcgctgtgttctgggatggagacaaggacagcaggagctacagtgtg
gtgaatgtggagaaggggcaggtggaagtgaagaggatgagctgtgcaggcagcagggtc
tgctgtcagatgaagatgggtaacattctatggatggccactgaggagcaggagattttc
atctacagtctgaaggatatgtgtccgctcagccagccccagaaacacttctcctgtcca
gccatcatcacctgcctgctccctgttccagcccaagaacagagtctggccagagtgttt
gcggggatgtctgacggcctggtggcagtgtacagcctgctggaggacctccctctggag
ggggagatctacctgtgctcacacaccctcaacaggacgctgttcgccctgaaggactcg
gaccccaggcagaggccctacccagtcagcagcatggtgctggtcagtaggggatcccag
ttatggctctccaatggtccaggcgtgctggtcattgactgtctgagtcttcaggctgtt
cgaaggctcgatccctacagcccgccgtcctccattgtatccatgacaaccagcttcagc
ctatggggagaggaggcggtgtggacactggacgaccacgccaacacgctgctgctctac
cacgccacctcctaccagctctgtgcccactacagctgcggagacagccatcctcttcga
gacgtcttctctgtgcagcgtcctgcagcggttaccacggtgacaaccactgaattcaaa
gccacggccaaagaaaatatgctgaaaaggactgatggagaagtgacactgatgtacagt
gaggaggccggcactcagatcctccagcagcaggattcactgaccgactacaatcccctc
caatccactcagcaggaccagcagcaggaccaacagcaggaccagcagcaggaccagcag
caggaccagcagcaggtccaggaccagcagcaggaccagcagcaggtccaggaccagcag
caggactctgcagagagcgtgaggccctcagagccccggctgcaggccttcaccctgctg
gaagtgagccgaactctgtggatccccaggcgtggaggtgatgtaatggtcattgaactg
cagtctcatggtgatgagctgagagggcgggtcactgctgtcctcaccccccccggacgt
tcttctctggggactctgatggaggcagctatagtggcaaaggacacagttgtctgtggc
tttcagaaggaaaacatggagtggtgcctgtgtgtctggaggggctggggctgccgcgaa
ctggaggtcttctaccggtcctacgaggagctgggccgcttggagagcagcatgaggaga
agaaggtag
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integrated database retrieval system
