Trematomus bernacchii (emerald rockcod): 117491156
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Entry
117491156 CDS
T09643
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117491156 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117491156 (prpf38a)
Spliceosome [BR:
tben03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117491156 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
117491156 (prpf38a)
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
117491156
NCBI-ProteinID:
XP_033996912
EnsemblRapid:
ENSTBNG00005024216
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKVKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRHVLEEAEMLDPR
ISALEEDLDEVESSDEEEEDEEKPERLQTPEPHRRRDSYRDDRPRRSPSPRYRRSRSPRR
RSRSPKRRTPSPRRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSSKK
SHKKSRRGNE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgttaaagatgctaacagtatacacgggaccaacccgcagtatttg
gtggagaaaatcatccggactcgaatatacgaatcaaagtactggaaggaggagtgcttc
ggtctcaccgctgagctggttgtagataaagccatggagttgaaatatgttggtggagtg
tttggaggaaacatcaagcccactcccttcctctgcctcactctgaagatgctgcagatt
caacctgaaaaagacatcatcgttgagttcattaaaaacgaggatttcaaatatgttcgt
ctactgggagcgatgtacatgaggttaactggcactgctgttgattgctacaaatacttg
gagccgctgtataacgattacagaaaagtcaagagtcagaacagaaacggagagtttgaa
ctgatgcatgttgacgagttcattgatgagctccttcacgcagagaggatgtgtgacatc
attcttcctcggcttcagaaaagacacgttctggaggaggctgagatgttagacccacgt
atcagcgctctggaggaggatctggacgaggtagagagcagtgatgaggaagaagaggac
gaagagaagccagagagactccagacccctgagccccacagacgccgcgacagttaccgt
gacgacagaccacgtcgctctccttcgccacgttacagacgcagtcgctccccaagacgg
aggagccgatcgccaaagaggcgaaccccatcgccccggagagaccgccatcgcagcaag
agcccccgccgccaccgcagccgctccagagaccgccgccaccgctccaaatccccaggt
caccacagaagccacagacaccgcagccactcaaagtccccagagaggagttcaaaaaag
agtcacaagaagagtcgaagaggaaatgagtga
DBGET
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