KEGG   Trematomus bernacchii (emerald rockcod): 117491156
Entry
117491156         CDS       T09643                                 
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117491156 (prpf38a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tben03041]
    117491156 (prpf38a)
Spliceosome [BR:tben03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    117491156 (prpf38a)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    117491156 (prpf38a)
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 117491156
NCBI-ProteinID: XP_033996912
EnsemblRapid: ENSTBNG00005024216
LinkDB
Position
Unknown
AA seq 310 aa
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKVKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRHVLEEAEMLDPR
ISALEEDLDEVESSDEEEEDEEKPERLQTPEPHRRRDSYRDDRPRRSPSPRYRRSRSPRR
RSRSPKRRTPSPRRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSSKK
SHKKSRRGNE
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcaaacagaaccgttaaagatgctaacagtatacacgggaccaacccgcagtatttg
gtggagaaaatcatccggactcgaatatacgaatcaaagtactggaaggaggagtgcttc
ggtctcaccgctgagctggttgtagataaagccatggagttgaaatatgttggtggagtg
tttggaggaaacatcaagcccactcccttcctctgcctcactctgaagatgctgcagatt
caacctgaaaaagacatcatcgttgagttcattaaaaacgaggatttcaaatatgttcgt
ctactgggagcgatgtacatgaggttaactggcactgctgttgattgctacaaatacttg
gagccgctgtataacgattacagaaaagtcaagagtcagaacagaaacggagagtttgaa
ctgatgcatgttgacgagttcattgatgagctccttcacgcagagaggatgtgtgacatc
attcttcctcggcttcagaaaagacacgttctggaggaggctgagatgttagacccacgt
atcagcgctctggaggaggatctggacgaggtagagagcagtgatgaggaagaagaggac
gaagagaagccagagagactccagacccctgagccccacagacgccgcgacagttaccgt
gacgacagaccacgtcgctctccttcgccacgttacagacgcagtcgctccccaagacgg
aggagccgatcgccaaagaggcgaaccccatcgccccggagagaccgccatcgcagcaag
agcccccgccgccaccgcagccgctccagagaccgccgccaccgctccaaatccccaggt
caccacagaagccacagacaccgcagccactcaaagtccccagagaggagttcaaaaaag
agtcacaagaagagtcgaagaggaaatgagtga

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