Trematomus bernacchii (emerald rockcod): 117491167
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Entry
117491167 CDS
T09643
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117491167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117491167
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117491167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117491167
NCBI-ProteinID:
XP_033996924
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MAVNIPGLIAMVIFYLLVLGTGIWASFKSKREQKRSAATGMDMALLGNRSISLVVGIFTM
TATWVGGGFIVGTAEMVYLPSMGLTWAILMLLAYSSSFIICGLVFVKPMRDRNCVTLLDP
FNAKYGKGITATLSLASISLDVLWVPCTLIGLGGTMTVVLDFPFSVCVWISAAVAIIYTL
LGGLYSVAYTDIVQLILLFISLWICVPFALVNPHVSDISHTLMNNTLHTPWIGSPELNKS
WILMDDFLFFALGSLGYQCLHQRTLSASSTSTAKTTCYVSAFFLPLLGIPSVLFGAAAAS
TDWNMTSYGSPSPYERGESALVLPLSLQHLTPSFISIIGIGAVAAAAMSSLDSYLLSAAS
VFTSSIYKNILRPQASDREIQWVLRASVLVVGVSGSSLTFLKNSILLFWFIGAEIAYVIL
FPQLVCVLFVDISNSYGAVMGLLLGIMVRLLSGDPSLGIAPIIHFPGCTLENGVYVQYSP
VRTISMLSAIAAILLFSYLTSVLFNKGHLPEKWDVFKVKTQHSLQPDTPTDGATEHNESE
KLNGSNSQTEASTLMASTNC
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaacatcccaggattgatagccatggtgattttctacctgctggttcttggg
accggcatctgggcttctttcaagtccaaaagggaacagaagagaagcgcagccactggg
atggatatggctctgctgggaaaccggagcattagcttggtggtggggatcttcacaatg
acagctacctgggtcggaggaggcttcattgttggcacagctgagatggtgtacctgcca
tcaatgggtctaacctgggctatcctgatgctgttggcatacagctcatcttttattata
tgtggcttggtgtttgtaaagccgatgagagacagaaactgtgtgacgttgctggacccc
ttcaatgccaagtatggaaaaggaataactgctacactgtccctggcttcaattagtctt
gatgttctctgggtaccctgcacactaattggtttaggaggaaccatgactgtggtcctg
gattttcccttcagtgtgtgcgtatggatctctgctgccgttgccattatctacactctg
ctggggggtctctactcggtggcctacacagatattgtacagcttatccttttattcatc
agcttgtggatctgtgttccctttgctctggtgaacccccacgtttcggacattagtcac
acactgatgaacaacaccctgcacactccctggataggatcaccggagctgaacaagtcc
tggatactgatggacgatttcctattcttcgccctggggagtctgggatatcagtgcctt
catcagaggactttgtcggcatcgtccacatcgacagcaaagaccacttgctatgtttct
gctttcttcctgccacttttggggattccttcagtactttttggggcagctgctgcctcc
acagactggaacatgacttcgtacggttctccgtctccatatgaacgtggggaatcagct
ctagttctgcccctcagcctccaacatctcactccttccttcatctctatcatcggtatt
ggagctgtggccgccgccgcgatgtcgtccctcgactcctatttgctttctgcagcttct
gtcttcacctccagcatttacaagaacatcctgagaccccaggcgtcggacagggagatc
cagtgggtgctccgagcctccgtgttggtcgtgggcgtgagtggttcatcgcttaccttc
ctgaaaaacagcatcttattgttctggttcatcggagctgaaatcgcctacgtcatactc
ttccctcaactcgtctgcgtccttttcgtcgacatctccaacagttacggggctgttatg
ggtttgttgttgggaataatggtacgactgctaagtggggacccatcactagggatcgca
ccaatcatacacttcccaggatgcactcttgagaacggtgtttacgtccagtactctcca
gttagaaccatctccatgctgtcggccattgctgccatcttgttgttctcctacctgact
tctgtgctcttcaacaaaggccatcttcctgagaagtgggatgtgtttaaagtgaaaacc
cagcactcattgcaaccagacacaccaacagatggcgctacagagcataatgagagtgag
aaactgaatggaagcaactctcagacagaggcatcaacgctaatggctagcacaaactgt
tag
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