Trematomus bernacchii (emerald rockcod): 117491169
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Entry
117491169 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117491169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117491169
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117491169
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SSF
NV_polyhedrin
FACT-Spt16_Nlob
Motif
Other DBs
NCBI-GeneID:
117491169
NCBI-ProteinID:
XP_033996926
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MAVNIPGLIAMVIFYLLVLGXGIWASFKSKREQKRSAATGMDMALLGNRSISLVVGIFTM
TATWVGGGFIVGTAEMVYLPSMGLTWAILMLLAYSSSFIICGLVFVKPMRDRNCVTLLDP
FNAKYGKVVTAALSLASISLDFVWLPGTLIGLGGTMSVVLDFPFSVCVWISAAVAIIYTL
LGGLYSVAYTDIVQLILLFISLWICVPFALMSPYVSDISQTLMNNTLHTPWIGSPELKKT
WILMDNFLFMALGSLGYQCIHQRTLSASSTSTAKTTCFFSAFFLPILGIPSVLLGAAAAS
TDWNMTSYGSPSPYERGESALVLPLSLQHLTPSFISIIGIGAVAAAAMSSLDSVLLSAAS
VFTSSIYKNILRPQASDREIQWVIRASVLVVGVSGSSLSYLKNSVLLFWFIGAEIAYVIL
FPQLVCVLFVDISNSYGAVMGLLLGIMVRLLSGDPSLGIAPILHFPGCTLENGVYVQYSP
VKTISMLSAIAAILLFSYLTSVLFNKGHLPEKWDVFKVKTQHSLQPDTPTDGATEHNESE
KLNGSNSQTKASTLIASTNC
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaacatcccaggattgatagccatggtgattttctacctgctggttcttgga
nccggcatctgggcttctttcaagtccaaaagggaacagaagagaagcgcagccactggg
atggatatggctctgctgggaaaccggagcattagcttggtggtggggatcttcacaatg
acagctacctgggtcggaggaggcttcattgttggcacagctgagatggtgtacctgcca
tctatgggtctaacctgggctatcctgatgctattggcatacagctcatcttttattata
tgtggcttggtgtttgtaaagccgatgagagacagaaactgtgtgacgttgctggacccc
ttcaatgccaagtatggaaaagtagtaactgctgcactgtccctggcttcaattagtttg
gattttgtctggttaccaggcacactaattggtttaggtggaactatgagtgtggtcctg
gattttcccttcagtgtgtgcgtatggatctctgctgccgtcgccattatctacactctg
ctggggggtctctactcggtggcctacacagatattgtacagcttatcctcttattcatc
agcttgtggatctgtgttccctttgctttgatgagtccctacgtttcggacattagtcag
acactgatgaacaacaccctgcacactccctggataggatcaccggagctgaaaaagacc
tggatactgatggacaatttcttattcatggccctggggagtctgggatatcagtgcatt
catcagaggactttgtcggcatcgtccacatcgacagcaaagaccacttgctttttttcg
gctttcttcctgcctattttggggattccttctgtacttttgggggcagctgctgcctcc
acagactggaacatgacttcgtacggttctccgtctccatatgaacgtggggaatcagct
ctagttctgcccctcagcctccaacatctcactccttccttcatctccatcatcggtatt
ggagctgtggccgctgccgcgatgtcgtccctcgactccgttttgctttctgcagcttct
gtcttcacctccagcatttacaagaacatcctgagaccccaggcgtcggacagggagatc
cagtgggtgatccgagcctccgtgttggtcgtgggcgtgagtggttcatcgctttcctac
ctgaaaaacagcgtcttattgttctggttcatcggagctgaaatcgcctacgtcatactc
ttccctcaactcgtctgcgtccttttcgtcgacatctccaacagttacggggctgttatg
ggcttgttgttgggaataatggtacgactgctaagtggagacccatcactagggatcgca
ccaatcctacacttccctggatgcactcttgagaacggtgtttatgtccagtactctcca
gttaaaaccatctccatgttgtcggccattgctgccatcttgttgttctcctacctgact
tctgtgctcttcaacaaaggccatcttcctgagaagtgggatgtgtttaaagtgaaaacc
cagcactcattgcaaccagacacaccaacagatggcgctacagagcataatgagagtgag
aaactgaatggaagcaactctcagacaaaggcatcaacgctaattgctagcacaaactgt
tag
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