Trematomus bernacchii (emerald rockcod): 117491176
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Entry
117491176 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117491176
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117491176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
LRR_4
Phage_portal
DFF-C
Motif
Other DBs
NCBI-GeneID:
117491176
NCBI-ProteinID:
XP_033996931
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MESSKQQREESPEPSCVSLKSDRSKGALILFKDGRPSNDPVSQQQREKSPGPSCVSLKSD
RSKGALITFKDGSCSSDPVEDQQSSEVPRGQSAQQHQTQLDSIFMLLEDNINTFVKNELK
KFQKALSSDYPECLESQREDEEVLDSEDEEQRRSIREAFLNISLHFLRSMKQEELAERLQ
SRSRCGECQRKLKSNLQERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVNDEHEVR
QIETASRKPDRPETTIRQEDLFKASPGRDAPIRAVMTKGVAGIGKTVLTQKFTLDWAEGK
ANQDIQFTFPFTFRELNVVRENKYSLVELVHHFFSETRDAGICRFDQFPVVFIFDGLDEC
QLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPGAANQIPPECVDMVT
EVRGFTDPQKEEYFRKRFRDQEQIISHIKTSRSLHIMCHIPVFCWISASVLEEVLKTREG
GELPKTLTEMYIHFLVVQSKVKNVKYDGGAETDPHWNKKSRKMMESLGKLAFEQLQKGNL
IFYESDLTECGIDIRAASVYSGVFTQVFREERGLYHKDKVFCFVHLSVQEFLAALHVHLT
FINSGVNLLSEEPAPSRLPKVFRIKPKLTHLYQNGVDQALQSPNGHLDLFLRFLLGLSLQ
TNQKLLRGLLTQRGSSSKTNKKTVQYIKKRIDEDLSPERSINLFHCLNELNDRSLVEQIQ
QYLSSGSLSTDNMSPAQWSALVFILLSSEEDLDVFDLKKYSASEEALLRLLPVVKASRKA
LLSGCNLSERTCEALSTVLSSQSSSLRELDLSNNNLQDSGMKLLSAGLESPHCTLETLRL
SGCNLSERSCEALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPHCTLETLRMEP
GGVRWLRPGLRKYSFELSLDTNTANRKLKLSDNNRTLTYVREEQPYPDHPERFDFWEQLM
CREALTGRCYWEVKWRGEVTISVTYRGISRRGDSEDCLFGWNDQSWSLSWSDDGYSVWHN
KTETQISSSSSSSSSSSSSSFPSGRVAVYVDHPAGSLSFYRVSSDTLIHLHTSRTTSTEP
LYAGFTVCSGSVSLCPLQEEESPPVPETSSLLPR
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggagagctccaagcagcagagagaagagtctcctgaacccagctgtgtgtccctgaag
agtgatcggtctaagggtgctctgattctcttcaaagatggacgtccttccaatgaccca
gtttcccagcagcagagagaaaagtctcctggacccagctgtgtgtccctgaagagtgat
cggtctaagggtgctctgattacattcaaagatggaagttgttcttctgatccggtagag
gaccagcagagctcagaggttcccagaggtcagtctgcccagcagcatcagacacagctg
gactccatatttatgctgctggaggacaacatcaacacttttgtgaagaacgagctgaaa
aagttccagaaggctctgagttcagattacccagaatgcttagagagtcagagggaggat
gaggaggtgttggacagtgaggatgaagagcagaggaggagcatcagagaggcatttctg
aacatctcactgcacttcctgaggagcatgaagcaggaggagctggctgagcgtctgcag
agcagaagtcgttgtggagaatgtcagcgtaaactgaagtctaacctacaggagaggttc
cagtgtgtgtttgagggcattgctaaagcaggaaacccaacccttctgaaccagatctac
acagagctctacatcacagagggggggtctgcagaggtcaatgatgaacatgaggtcaga
cagattgaaacagcatccaggaaaccagacagaccagaaacaaccatcagacaagaagac
ctctttaaagcctcacctggaagagatgcaccaatcagagcagtgatgacaaagggcgtg
gctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaaggcaaa
gccaaccaggacatccagttcacatttccattcaccttcagagagctgaatgtggtgaga
gagaacaagtacagcttggtggaacttgttcatcacttcttctctgaaaccagagacgca
ggaatctgcaggtttgatcagttcccggtcgtgttcatctttgacggtctggatgagtgt
caacttcctctggacttccacaacactgagatcctgactgatgtcacagagtccacctca
gtggatgtgctgctgacaaacctcatcagggggaagctgcttccctctgctcgcctctgg
ataaccacacgacctggagcagccaatcagatccctcctgagtgtgtggacatggtgaca
gaggtccgagggttcactgacccacagaaggaggagtacttcaggaagagattcagagat
caggagcagatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatc
ccagtcttctgctggatctctgcttcagttctggaggaggtgttgaaaaccagagaggga
ggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaa
gtgaagaacgtcaagtatgatggaggagctgagacagatccacactggaacaaaaagagc
aggaagatgatggagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctg
atcttctatgagtccgacctgacagagtgtggcatcgatatcagagcagcctcagtgtac
tcaggagtgttcacacaggtctttagagaggagagaggactgtaccacaaggacaaggtg
ttctgcttcgtccatctgagcgttcaggagtttctggctgctctccatgtccatctgacc
ttcatcaactctggggtcaacctgctgtcagaagaaccagcaccctccaggctgcctaaa
gtcttcagaatcaaacccaaactaacacatctctaccagaatggtgtggaccaggcctta
cagagtccaaacggacacctggacttgttcctccgcttcctcctgggtctttcactgcag
accaatcagaaactcctacgaggcctgctgacacagagaggaagtagctcaaagaccaac
aagaaaacagtccagtacatcaagaagaggatagatgaggatctgtctccagagagaagc
atcaacctgttccactgtctgaatgaactgaatgatcgttctctagtggagcagatccaa
cagtacctgagttcaggaagtctctccacagataatatgtctcctgctcagtggtcagct
ctggtcttcatattactgtcatcagaagaagatctggacgtgtttgacctgaagaaatac
tctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaggaaggct
ctactgagtggctgtaacctgtcagagagaacctgtgaagctctgtccacagtcctcagc
tcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcagga
atgaagctgctgtctgctggactggagagtccacactgtactctggagactctcaggctg
agtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagtcctcagctcccag
tcctctagtctgagagatctggacctgagtaacaacgacctgcaggattcaggagtgaag
ctgctgtctgctggactggagagtccacactgtactctggagactctcaggatggagcct
ggtggagtccggtggttgagacccggtctgaggaagtattcctttgaactctcactcgac
acaaacacagcaaacagaaaactcaaactgtctgacaacaacaggacgctgacatatgtg
agagaggagcagccatatcctgatcatccagagaggtttgacttctgggaacagctgatg
tgcagagaagctctgactggtcgctgttactgggaggtcaagtggagaggagaggttact
atatcagtgacttacagaggaatcagcaggagaggagacagtgaggactgtttgtttgga
tggaatgatcagtcctggagtctgagctggtctgatgatggttactctgtctggcacaat
aagacagaaacacagatctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
ttcccctctggtagagtagcagtgtatgtggatcatcctgctggctctctctccttctac
agagtctcctctgacacactgatccacctccacacctccagaaccacatccactgaacct
ctctatgctgggtttacagtttgttctggatcagtgtctctgtgtcctctgcaggaggaa
gagtctcctcctgttccagaaacgtcctccctgctgcccagatag
DBGET
integrated database retrieval system
