KEGG   Trematomus bernacchii (emerald rockcod): 117491227
Entry
117491227         CDS       T09643                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117491227 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117491227 (exosc6)
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117491227 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 117491227
NCBI-ProteinID: XP_033996996
LinkDB
Position
Unknown
AA seq 274 aa
MPTDTKRVRGPEVSQSPTLFLCKHAAVLPSHGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKLMCCVYGPREMERKDETDMKCGKLTTDMRFAPFSCLERGSWIQGSQDKDL
SLMLHESLQPAVCLHKYPRSQIEVNVMVVENSGSVLAHAVTCASLALADAGIEMYDLVLG
CSIRQNGASYVVDPSYMEENSCNSVSSENQGGLTVAFLPSLNQISGLQSDGEMTEETLTA
GVRTCIEGCYKLYPVIQQALTKAVRRAAPPPSES
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccgactgacaccaaacgtgtacgcggcccagaagtttctcaaagtccgactttgttt
ttgtgtaaacatgcggccgttctcccctcgcacgggcccagagcggacggtcggcagcgg
gaccaggtagacgtccggccggtgtttgtgcgctgcgggctggtgagccaggctaaaggc
tccgcgtacatcgaagctggaaacaccaagttgatgtgctgcgtttacggccccagagaa
atggagcggaaagatgagaccgatatgaaatgtggaaagttgactactgacatgcgtttc
gctccattttcctgcctggagaggggctcctggattcagggaagccaggacaaggacctc
tccctgatgctacatgagagtctgcagccagccgtgtgcctccataaatatccccgctct
cagattgaggttaatgtgatggttgttgagaacagcggctcagttctggcccatgctgtc
acgtgcgcttccctcgctcttgcagatgcaggaatcgaaatgtatgatctggtgcttggt
tgttccatacgtcagaatggcgcctcttatgttgtcgatccttcttacatggaggaaaac
agctgcaactcagtcagcagtgagaaccagggtggtctgactgtagctttcctccctagc
ctgaaccagatttctgggctgcagtcagatggagaaatgactgaagagactctgacagct
ggggtccggacctgcatcgagggatgctataaactgtaccctgtcatccaacaagccctg
accaaggctgtgcgccgagctgcccccccgccatcagagagctga

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