Trematomus bernacchii (emerald rockcod): 117491256
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Entry
117491256 CDS
T09643
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117491256 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117491256 (fan1)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
117491256 (fan1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
117491256 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
SAP
BsuBI_PstI_RE
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
117491256
NCBI-ProteinID:
XP_033997037
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MTERASKVTPRGSLSLSKSKKKGNVKAGISASPATTTPPISSFFSSQPPPKLACPLCGQL
VPRFKINEHIDLQCQNFERGDSSAASASDTVVPSKQLSPIRNPPKSLKLDPKNEEEIKGT
KTSPYFKKNDSQQAPLELRSKSVVRTIDLGSLSSKLSMKGHKSPKRTKTGDKRAPMDPEK
AICSSPETLSSSQKENIQTLEAEQDGVTVIDLTDTSNDSPTAVEDISCLDKGRNPERKAP
KSEKVVTLKLLSSSSKVLVSKLSKRKKGTPSTGSASGLRKKAKYEGSSVEPEDVFSSDIK
AAMTDTDQTKTEGPSTTTCDPLLTSEETNDAAIKSDTQSESITESIPSDQAVDPLRLPYY
LRNFLTVLQAVLENEDDRSLFNQDDMSLIHAFKKLSVMGQKLYVRLFQRKLKWLQVNKLD
YEEICSDLGPVAQELVQTGFLQSECELQDLGETLDLLPAPDLKSLAKTFHLGNSGTQKQQ
LVDGLLRLSRQKSLFSVSAAQNIIGAVILKRAKQLASSCVRLCRGARAVFSRILLLFSLT
DTLEDEETAAGGQSQLFTILLVNSGRLAFPDYTVQRSAKVFQDREDLIRYEASMRTLQEV
VSAMQGGQWEEAMELYTAAKSVWKELRTNHDLSHEEELPVFLRSFTTGWAYTRVLTRGVE
ISQRLRCYEEAVEELQSLLSQSVYCPDSRGRWWDRLALNLHQHLKKPEQAICAIRDGMSD
PLVRTGHKLSLHQRAVRMKESASLKKHRLQMNDMPTIQVEDVTHVTIRGQLFPHEGGMGK
SRFLLPAIGDGGESSDATIICSVEDLSLAHYHQQGFDQGIHGEGSTFSTLFGLLLWDIIF
MEGIPDVFRNPYQTCPLDLYTDCFYENRKEAIDCRVQLLSEASVETLHVMLAEVWTSHEG
IVCSLVNWERFSSLQQAQSLVSCMRGAFLGGVIKRMAKDYRHCRGGLPDLVVWNTSNNTY
KLVEVKGPSDRLSQKQQIWLDELQKLGADVEVCHVTATGARGARLE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaagagccagcaaagtaacaccgagaggaagtttgtcattgtctaagagtaag
aagaaaggcaatgtcaaagctgggatttctgccagtcctgccaccaccacacctcccatc
agctccttcttcagcagccagcccccccctaaactggcctgccccctgtgtggccagctg
gtaccaagattcaagatcaatgagcacattgatttgcaatgtcagaactttgagagagga
gacagcagtgcagcctcagcaagtgatactgtcgtgccaagcaagcagctgtcacccata
aggaatcccccaaagtccctaaagctggatccaaagaatgaagaagaaatcaaaggcacc
aagaccagcccttatttcaagaagaatgattctcagcaggcaccactggaattgagaagt
aaaagtgtggtgaggaccattgacctgggaagtctctcctccaagttatctatgaaagga
cataagtcacctaagaggacaaagacaggagataaacgggcaccaatggatcctgaaaag
gcgatatgttcatctcctgagaccctcagcagctcacagaaagaaaatattcagacttta
gaagccgaacaagatggtgtgacagtcattgacctcacagacactagtaatgactctcca
acagcagtggaagatatatcatgtttagacaaaggacgtaatcctgaacgcaaagctcct
aaatcagagaaagtggttactctaaagctgctctcttcttcctctaaagttttggtgtct
aaactatcaaagagaaaaaagggaacaccttccactggcagcgcgtcaggactaagaaag
aaagcaaaatatgaggggagcagcgttgagccagaggacgtgttttctagtgacattaaa
gcagcgatgactgatacagaccagactaaaactgagggaccttctaccactacttgtgac
ccccttctgacttcagaggaaacaaatgatgcagcgatcaaaagtgatacacagtcagag
tctattactgagagcatcccgagtgaccaggctgtcgatcccctacggcttccctactac
ctccgtaacttcctgaccgtactacaggctgtgctggagaatgaggacgacaggtcattg
ttcaatcaggatgacatgtcactcatccatgcattcaagaaactctcagtcatggggcag
aagctgtatgtgagactctttcagaggaaactgaagtggctccaagtgaataaactggat
tatgaagagatatgcagtgatctgggacctgtggctcaggagctggttcaaactggtttt
ctccagtcagagtgtgaacttcaggacttgggggagactctcgatctcctgcccgctcct
gatctcaaatctctggctaagactttccatctgggcaattctgggactcagaaacagcag
ctggtggacggacttctccgtttgagccggcaaaagtccctcttctctgtgtccgctgct
cagaacatcattggggctgtcattctcaaaagggcaaagcagcttgcaagttcctgtgtg
cgcctgtgtcgcggtgctcgagccgtcttctctcggatcctgctcctcttctctttgacg
gacaccctggaggacgaggagacggcggctggtgggcagagccagctgttcaccattctg
ctggttaactctggacgcctggccttcccagactacaccgtgcagcgttcagccaaggtg
ttccaggacagagaggatctcatcagatatgaagcatccatgcggaccctgcaggaggta
gtgtcagccatgcaggggggtcaatgggaagaggccatggagctctatactgcggctaaa
agtgtctggaaggagctgaggacaaaccatgacctcagtcatgaggaggagctgcctgtg
ttcctacgcagcttcactacaggatgggcttacactcgggtcttaaccagaggggtggag
atctcgcaaaggctacgttgctatgaggaagcagtagaggagctgcagtccttactgtcg
caatctgtttactgtcctgacagtcgaggccgatggtgggacagactggcactcaacctt
caccagcaccttaaaaaacctgagcaagctatatgtgctatcagagatgggatgtcagac
cctctggtgcgtactggacacaaactgtctcttcatcagagagctgtcaggatgaaagag
tctgccagcctgaagaagcatcgcctgcaaatgaatgacatgcccactatccaagttgaa
gatgtcactcatgtgaccatccggggacagctgttcccccacgaggggggcatgggaaaa
tctaggtttcttttaccagcaattggagatgggggagagagttctgatgccactattata
tgctctgtggaagacctgtctttagcacattaccatcaacaaggctttgaccaagggatc
catggcgagggctctacattctcaacattgtttggccttctgctatgggacatcattttt
atggagggtattccagatgtttttaggaatccataccagacatgcccgctggatctttac
actgactgtttctatgagaacagaaaagaggcgatagattgtcgtgtgcagttactcagc
gaggcttctgtggagactctgcatgtcatgttggcggaggtgtggacctcccatgagggt
atagtgtgttcactggtcaactgggagcgcttctcatccctgcaacaggcacagtccctt
gtgtcatgcatgagaggagccttcttaggaggggtaataaaacgaatggcgaaggactac
agacactgccgtggaggtttgcctgatctagtggtgtggaacacctcaaacaacacctac
aagctggtggaggtgaaggggccaagtgaccggctgtcccagaagcagcagatctggctg
gatgagcttcagaagctgggggcagatgtggaggtgtgtcacgtgacggcgacaggagcc
agaggagctcgtctggaataa
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integrated database retrieval system
