Trematomus bernacchii (emerald rockcod): 117491308
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Entry
117491308 CDS
T09643
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117491308
04121 Ubiquitin system [BR:
tben04121
]
117491308
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117491308
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117491308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
117491308
NCBI-ProteinID:
XP_033997106
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MSQTRKRSSIWMHFKQNPGSDKAECTICKGKISFKAGSTNNLHRHLKTQHPTVQVAELRQ
QGSNNNDGDGASASAETPTTSSQSSSETTNRPTLVPGQAPSSHRTTGTIPKTKQTHLHSY
VAPVITPMRQGKIDEELVKMIATDFQPFSIVEDKGFKRYSNALNPSYSLPSRKTVSQTIA
NMYQREAASLKEKVSKLSAVCLTVDCWTSRATTSFMAVTCHFIEDFKMSSCLLDCFEFSE
RHTADNLAKKLLNVAKDWKVEGKVVCCVTDNAANITKAIQIAKWTHLPCMAHTINLIARD
SLKGLKPILDKVKEVVEYFHRSTVGAEKLKATQNQMGMAELRLKQDCITRWNSTYDMLKS
FLKSKDAIISTLAITNASVSPLSQEEWSILQEVCTILEPFQEVTVEISAESYVTASMVIL
LAKGLQKVTVSRQGSATTQQASDLGNSLCANMASRFLRMEYNHTLGDATALDPRFKKVAF
GDARAADEAFQRIATAAGRVTLSSSEPSQQPDQQEGAGSAAEGSVVWRYFHDRVAGAVST
RNPTADAIMEVRSYLEEPLLPKSSDPLKWWESRATLYPRLTKLMAERLCIVATSVPSERI
FSKTGQIVSERRNRLKPSKVRELVFLNANLP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacgcgaaaacgcagcagcatttggatgcactttaaacaaaatccaggcagt
gataaagcggagtgcaccatttgtaaaggaaaaatatcatttaaagcagggtcaaccaat
aatcttcatcgccacttaaaaacacagcatccgacggtgcaagtggccgagctgagacaa
caaggttccaataataatgacggagacggcgccagtgcttctgctgaaaccccgaccaca
tcaagtcagtcatcatctgaaactaccaataggcctacattagtgcctggccaggcacca
agctctcatagaaccactggcacaatacctaaaacaaaacagactcatctccacagttat
gtagcacctgtcataaccccaatgagacaaggtaagatagatgaagagcttgttaaaatg
attgcaactgacttccagccattcagtattgtggaagacaaaggattcaagcgatacagc
aatgctctcaacccttcctacagtcttccatcaaggaagacagtatcccagacaattgca
aacatgtatcagagagaagcagcatcactgaaggaaaaggtgtctaaactgtcagcagtt
tgcttaaccgtagactgttggacatcaagggctacaacctcatttatggcagtaacatgc
cacttcattgaagatttcaagatgtcctcctgcctattggactgttttgaatttagtgaa
cggcacacagcagacaatctggccaaaaagcttctcaatgttgcaaaagattggaaagtg
gaaggtaaagtggtttgctgcgtaactgacaatgctgctaacattacaaaggctatacaa
atagcaaaatggacccaccttccatgcatggcacatactatcaatttgattgccagagat
tccctcaaaggcctaaaacccattctggataaagtgaaagaggtggtggaatactttcac
aggagcacagtgggtgcagaaaaactgaaggccactcaaaaccaaatggggatggcagag
ctacgactcaaacaggactgcatcacaagatggaactctacatatgacatgttgaagagt
tttctgaaatccaaggatgccattatctccaccctggccatcacaaatgcatcagtcagc
cctctatcccaagaagaatggagcatactgcaggaggtgtgcactatcctggagcccttt
caagaagtcactgttgagatcagtgcagaaagctacgtgaccgcctcaatggtaatattg
ctggcaaagggactgcagaaagtcacagtcagccgccagggaagtgcaacaacacaacaa
gcatcagatttggggaactcgctatgtgcaaacatggcaagtagattcctcagaatggaa
tataaccacacccttggagatgctacggcacttgacccaagattcaaaaaggtggcattc
ggggatgccagagctgcagatgaggctttccagagaatagcaactgcagcaggaagagtc
actctcagcagcagcgaacccagccagcaaccagatcaacaggaaggagcaggcagtgct
gcagaaggatcagttgtttggaggtatttccatgaccgtgtcgctggtgcagtgtcaaca
aggaatcccacagcagatgccatcatggaggtgcggtcttacctagaggagcctcttctt
ccaaaatcctcagatcctcttaagtggtgggaaagtcgagccaccttataccccaggctc
accaagctcatggctgaaaggctttgcattgtggcaacgtcagttccgtcagagagaata
ttctcgaagactggacaaatagtatcagagaggagaaatcgccttaagccctcaaaagtg
agggaacttgttttccttaatgcaaatttgccatag
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