Trematomus bernacchii (emerald rockcod): 117491326
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Entry
117491326 CDS
T09643
Symbol
rapsn
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse
KO
K24924
receptor-associated protein of the synapse
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117491326 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
117491326 (rapsn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
TPR_MalT
SNAP
zf-RING_11
TPR_11
zf-RING_2
TPR_16
TPR_10
zf-RING_5
TPR_19
DUF3856
RPN7
RNPP_C
Prok-RING_4
zf-RING_UBOX
zf-RING_Vps41
zf-rbx1
AKNA
zf-C3H2C3
Cys_rich_CPXG
zf_RING_Vps8
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117491326
NCBI-ProteinID:
XP_033997129
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MGQDQTKLQIEKGLRLYQSNQTDKALNVWTNVLWKTSDPGGKFRVLGCLITAHSEMGKYK
DMLKYALTQIDTAREMEDPDYLTEGYLNLARSNEKLCDFQKTVSYCKTCLNMQGTTVSLQ
LNGQVCLSMGNAYLGLSVFQKALESYEKALRYAHNNDDKMLECRVCCSLGNIYVHLKDYE
KALFFPCKAAELVNDYGKGWSLKYRAMSQYHMSVAYRKLERLPDAMECCEESMKIALQHG
DRPLQALCLLNFADIHRCRSDGDKAFPRYESAMSIMTEIGNRLGQSQVYLGVAKCWLLQK
ELDKALESLQRAQELADGMGNKLCSLKVHSLSEGIYRTRGQQEELREQVVKFLQCVEELE
LYCGMCGESIGDRDQKLQALPCSHIFHLKCLQTNGTKGCPKCIKSSMKPGFV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgggccaggaccaaaccaagctgcagatagagaagggcctgaggttgtatcagtccaat
cagacggacaaagccctgaatgtctggacaaacgtgctgtggaagacctcagatcctggg
gggaagtttcgggtgttggggtgcctgatcacagcccactcggaaatgggaaaatataaa
gatatgctaaagtacgctctcactcagatcgacaccgccagggaaatggaggacccagac
tacctgacagagggctacctgaacttggcgcgcagcaacgagaagctgtgcgacttccag
aaaacggtgtcctactgtaagacctgcttgaacatgcagggtaccactgtcagcctgcag
ctcaacggccaggtttgtctcagcatgggcaacgcctacctcggcctcagtgtcttccag
aaagctctggagagctacgagaaggccctgcgctacgctcacaacaacgacgacaagatg
ctggagtgcagagtctgctgcagtctgggaaacatctatgtccatttaaaggactacgag
aaggcgctgttcttcccctgcaaagccgctgagctcgtcaacgactacggcaagggttgg
agcctcaagtatcgagccatgagccagtaccacatgtctgtggcctacaggaaactggag
cgcctgccggacgccatggagtgctgtgaggaatctatgaagattgctctgcagcacggt
gaccgtcctctgcaggctctgtgcttactaaactttgcagacatacaccgctgcaggagt
gacggtgataaagcattccctcgctacgagtctgcaatgagtatcatgactgagattgga
aaccgtctgggccaatcacaggtctacctgggagttgcaaagtgttggcttctgcagaaa
gagttagacaaggctcttgaatctttgcagcgagcccaggaattagctgatgggatggga
aacaagctgtgctcgctgaaggtgcacagcctgagtgaggggatctatcggacccggggg
cagcaggaggagctccgggagcaggtggtgaagttcctgcagtgtgtggaggagctggag
ctctactgcggcatgtgtggagagtccatcggggacagggaccaaaaactgcaggcatta
ccctgttcccacatcttccatctcaagtgtctgcagacgaacgggacgaagggctgtccc
aaatgtatcaagtcctccatgaagcctggatttgtgtga
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