Trematomus bernacchii (emerald rockcod): 117491333
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Entry
117491333 CDS
T09643
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117491333 (ppfibp1b)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117491333 (ppfibp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
PUMA_CC
Spc29
Motif
Other DBs
NCBI-GeneID:
117491333
NCBI-ProteinID:
XP_033997135
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MMADASDMLAAALEQMDGIIAGSKALDYSNGMYDCQSPTSPFMGSLRALHLLEDLRSVLE
LMDTDERESLRCQIPDSTADSLVEWLQGHLSNGHISLSGGDHYQERLSRIETDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLEEHREKLNATEEMLQQELHCRSTLENQKLELISEVSNL
KLKLNSMDKDRLDFDDRFRDSEDLILEINELRYRMTDLEGEKLQYEKKLKSTKEELAILR
RQLEGRDGEMRRLQDETGFKAIASSSSDPTERVSHPDETLRKRLKEKHVEVQRMKKAVES
LMAANEEKDRKIDELKQSLLRYKKVQEMVMSVQGKKEKGKDNEYFEGNGDGFNEFFLNIP
MSAESEKYDVLDVELKRRSPDELEMLNGQTEEPSPSPSPSDPERVSESAPTDAESCQDPI
KKGSQDQMERSNNEKNASEGISKMSGKPPVGSSVGSSATLPASTEDESFGSRKARSSFGK
GFFKLRGGKKTGSTPNLDRSRSASAPMLAETERPGTDHLDLAGLPQRSANSDSTNTLSTT
PEGRKKAKGIKKLFGKLKRSQSTTFNLDDNLPEGDFKRGGVRASAGPRLGWSRDLQKPNE
VDAPFARWSKDQVCDWLQDQGLGLYVNMARVWISSGQTLLQASQHDLERELGIKHPLHKK
KLQLALQALGSEEENNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDVL
SLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLRSA
DLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLIGSEAQ
QLKQECLENPDYTLLTATTKVKPRKMSFGNFGSLRKKKHEENEEYVCPMDVQMPKGRSFQ
KGYELQIYEDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEASNSPNPSVT
DEDSMA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgccagcgacatgttggccgccgccctggagcagatggatggcattata
gcaggctccaaggctctggactactccaatgggatgtatgactgccagtctcctacctct
cccttcatgggcagcctgcgggcacttcaccttttggaagacctcaggagcgtcctggag
ttgatggacaccgatgaaagggaaagtctacgctgccagatccccgactccacagctgac
agtctggtggagtggctccaaggtcacctgtctaacgggcacatctctctgagcgggggc
gaccactaccaggagaggctttccagaatcgaaactgataaggagtctctggtccttcag
gtgagcgtgctgacagaccaggtggaggctcagggagaaaagatcagagacctggacctg
tgtttggaagagcacagagagaaactcaatgccacagaggagatgctgcaacaggagctt
cactgcagaagtactctggagaaccagaagctggagctgatctctgaagtgtccaacctg
aagctgaagctgaactccatggacaaggaccgactggactttgatgacagatttagagac
agtgaggatttgattcttgagattaatgaactgcggtacagaatgacagacctggagggt
gaaaaactgcagtatgaaaagaaactcaaatccaccaaggaggagctagccatactgagg
aggcagctggagggcagagacggagaaatgaggcgactacaggacgagacaggtttcaaa
gccatcgcctcgagcagctccgaccccacagagagagtctctcatccagatgaaactctt
agaaagaggctgaaagaaaaacatgtggaagtgcagagaatgaaaaaggcagtcgagtcg
ttgatggcagcgaatgaagagaaggatcgtaagattgatgaactaaagcagtcgctgctg
cggtataagaaagttcaagaaatggtgatgtcagtgcaagggaagaaagagaaaggcaaa
gataacgagtatttcgagggtaatggcgatggattcaacgagttcttcctaaacatcccg
atgtctgccgagtcggagaagtatgacgtattagatgttgaactgaagaggaggagccca
gatgagttggagatgcttaatggtcagactgaagagccttcaccctctcccagcccttca
gatccagaacgagtgtcagagtcggcaccaacagatgctgaaagctgccaggatcccatc
aagaagggcagccaggatcagatggaaaggagcaataatgaaaagaatgctagtgaaggg
atcagtaagatgagtgggaagcctcctgtgggttcctctgtgggttcctctgcgaccctg
ccggcctccacagaggacgagagcttcggctccagaaaggctcgctcgtcctttggaaag
ggcttcttcaagctccgcgggggcaagaagacaggcagtactcctaaccttgaccgcagc
cggagcgcaagtgcccctatgctagctgaaacggagcgaccgggcaccgaccatctggac
ctggccgggctgccacagaggtcggctaacagcgacagcaccaacacactctccacgacc
cctgagggcaggaaaaaagccaaaggaataaagaaactctttgggaagctaaaaaggagt
cagtctaccacatttaacctggatgacaacctaccagagggagactttaagagaggcgga
gtgcgagcctcagcgggacccaggctgggatggtctcgggacctccagaaacccaatgag
gttgatgctccctttgcgcgctggtcgaaggatcaggtgtgcgactggctgcaggatcag
gggctcggtctctatgtgaacatggctcgagtgtggatctcctctggacagacgctgctg
caggcctcacagcacgacctggagagggagctgggcatcaaacacccgctgcacaaaaag
aagctgcagctggctctgcaggccctcggctcagaggaggagaataataaaggaaagctg
gactacaactgggtgaccagatggctggatgacatcggtctgcctcagtataagacccag
tttgacgaggggagggtggacggtcgcatgctgcactacatgacagtggatgacgtgctt
tctctgaaagtggggagtgtcctgcatcacctcagcatcaagagagccatccaggtcctc
cgactcaacaactacgagccaaactgcttgcgtcgaaggccatctgacgagaacaatatt
tctccagcagagatctcccagtggaccaaccacagggtgatggagtggctgcgctctgcg
gacctggctgaatacgctcccaacctgagaggcagcggagtgcacggaggcctgatggtc
ctggagccgcgctttaacgtggagaccatggctctgctgctgaacatcccccccaacaag
acgctgctgcgccgccacctcgccacacacttcaacctgctcatcggctccgaggcccag
cagctcaaacaggagtgtcttgaaaacccagactacactctgctgactgccaccactaag
gtcaagccaaggaaaatgtcatttggtaactttggcagtctgaggaagaaaaagcacgaa
gagaacgaggagtacgtgtgtccgatggatgtgcagatgccaaagggacgaagctttcag
aaaggctatgagctccaaatctacgaggacgacctcgacagactagaacagatggaggac
tctgagggaactgtgagacagatcggagctttctctgagggtattcaaaacctgacgagc
atgctaaaagacgatgaattcttcaaagaggcttccaattcaccgaaccccagcgtaaca
gacgaggactccatggcgtga
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