Trematomus bernacchii (emerald rockcod): 117491364
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Entry
117491364 CDS
T09643
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117491364 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117491364 (rasgrf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
IQ
Motif
Other DBs
NCBI-GeneID:
117491364
NCBI-ProteinID:
XP_033997185
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHAKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSQSAKESLEKQYYFTVSFTHENQKALELRTEDVKDCDEW
VAAISHASYRNLANEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
HLKDNEKINASPATTPTDDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERTSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKVKITRGRLG
SLSLKKEGERQCFLFSKHVIICTRGSGGKLHLTKNGVVSLIDCTLLEDPEGTDDEAKSDK
SGQDMEHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNSKLLYGESPSSPRAS
RKFSSPPPLAMTKNSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSTMSPFSK
TTLDINKLYVSSPVSSKIPDEGEDKKDKVEDTTVSKQDLSVREEGDNDPSQSDDGDAEAS
PTKSPTTPKNIKGKNSEFSLFSYNNGMVMSSCREMDNNRSALSAASAFAIATAGANEGTP
TKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFDNNNELKTK
AIVFLEEVMHDPELLTQERKAAANIIRTLTQEDHGDNQITLKDVTQLIGEGKVEAFESHS
ALEIAEQLTLLDHLVFKVIPYEEFFGQCWMKNDKNEKTPYIMRTTKHFNDISNLIATEIL
RCDDVVTRVVVLEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQTKAL
IDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSKM
RMISHIIREIRQFQQTAYKIDLQPKVAQYLLDNSFVLDEESMYEASLRIEPKVLN
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcacctacctggggcttttggcgaaa
aaggatggtacaagacgagggtgcttgagcaaaaagagctcagacaacacgaaatggcac
gcgaagtggtttgctttgttacagaatatgctcttttattttgagaacgagtccagctcg
agaccctcgggattatacctgttggagggatgcatatgcgacagggcgccttcaccgaaa
ccttcacagtcagctaaggagagtttggaaaagcagtactatttcactgtcagcttcacc
catgaaaaccaaaaggcgctcgagttacgcacagaagacgtaaaggactgcgatgaatgg
gtggctgcgatatcacacgccagttacagaaacttggccaacgagcatgagaccctcatg
cagaagtatcttcatctgcttcagattgtggagacggagaaaacagttgctaagcaactt
cgacaacagatagaagatggggaaatagagattgaaaggcttaagtcagagatctctgga
catctcaaggacaacgagaagatcaacgccagccctgcaacaacccccaccgatgacgac
tcagaaatcaagaaaatcaaaaaggtccagagcttcctgcgaggctggatctgcaggagg
aagtggaagacaatcatccaagattacatccgctcaccacacgcagagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcagaggccgagtacgtccagcagcttcac
atcctggtgaacaacttcctgaggccgctccgcatggccgccagctccaagaaaccgccc
atcacccatgatgatgtcagcagcattttcctaaacagtgaaactatcatgtttctacat
cagatattctaccaggggctaaaagccagaatagcgagttggccaacattagtgctggcc
gacctgtttgacatcctgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctcgctcactgcaagcagaacagagactttgacaagctgctg
aagcagtacgaggccaaacccgactgtgaggagaggactctggagaccttcctcacctac
cccatgttccagattcctcgctacattcttacactccacgaactcctggcccacacaccc
catgaacatgtagaaagaaccagtctggactacgccaaatccaagctggaggagctttcc
agaatcatgcacgatgaagtgagcgagaccgagaacatcaggaagaacctggcaatagag
cgcatgatcgtagagggctgtgagattcttcttgacaccagccagacgtttgtaagacaa
gggtctctcatccaggtgccgatgagcgagaaggtcaagatcacccgtgggcgactgggc
tctctgtctctgaagaaggagggggagaggcagtgctttctcttctccaagcatgtaatc
atctgcaccagaggatctgggggaaagcttcatctcaccaagaatggagtagtctcgctt
atagactgcactcttttggaggaccctgaggggacagatgatgaggccaaatcagacaag
agcggccaggacatggagcacctggacttcaagattgtggtggagccaaaggacagccag
tcattcacagtcatcctggtggcctcctccaggcaggagaagtctgcatggaccagtgac
atcagccagtgcatagacaacatccgctgcaatgggctgatgatgaacgccttcgaagac
aactccaaagtcacagtgccacagatgatcaagtcagattcaagtctgtactgcgatgat
gtagacattcgcttcagcaagatgatgaactcctgcaaggtgctacagatccgctacgcc
agcgtcgagcgcctgctggagagactgactgacctccgtttcctctccatcgacttcctc
aacaccttcctgcactcctatcgcgtgtttaccaccgctgatgtggtgctagacaagctt
atcaccatctacaagaagcccatcagtgccatccctgcgaggtccctggagttattcttt
gccagcagtcagaacagtaaactcctgtatggagagtctcccagctcccccagggcaagc
aggaagttctcctcccctcctcctctcgctatgacaaagaattcatcaccaaatcgccgg
cgtaagctgtccctcaacatccccatcattactgggggcaaagctcttgacctggctgcc
ctcagctgctcctcaaatggctatgcaagcatgtactcaaccatgtcaccattcagcaag
accaccttagacatcaacaaactgtacgtgtccagccctgtctcgagcaaaatccctgat
gagggggaggacaagaaggacaaggtggaggacaccacagtgagcaaacaagatctctct
gttcgagaagaaggtgacaacgatccgagccagagtgatgacggggacgcagaagcctct
cccaccaagtcacctaccaccccgaaaaacatcaaaggcaaaaactcagagttctctctg
ttttcatacaacaatggcatggtgatgtcctcatgtcgagagatggataacaaccgcagt
gccctgtctgccgcctccgccttcgctattgctacagctggagccaatgagggcacacct
accaaggaaaaatatcgacggatgtccctcgccagtactggtttcccaacagatcagaga
aatggagacaaagagtttgtgatcagacgagcagcgaccaacagagtcctgaatgtcctg
aggcactgggtgtccaaacactctccggattttgataataacaatgagctgaagactaaa
gctattgtgttcctggaggaagtgatgcatgaccctgagctgttgacccaggagaggaaa
gcagcagccaacatcatcaggactctaactcaggaagatcacggtgacaatcagatcacc
cttaaagacgtaacacaactgattggagaagggaaggtggaggcctttgagagtcactct
gcgttggagatcgctgaacagctcactctgctggaccacctggtgtttaaggtcatccca
tatgaagagttctttggacaatgctggatgaagaatgacaaaaatgagaagacgccgtac
atcatgagaacaacaaagcacttcaatgatataagcaacctaattgccacagagatcctg
cgctgtgacgacgtggtcactcgggtggtggtcttagagaaatgggtggctgtggcggac
atctgtcgctgcctccacaactacaacgccgtgctggagatcacctcgtccctcaaccgc
agctctgtcttccgcctcaagaagacctggctcaaggtttccaagcagacaaaagcattg
attgacaagctgcagaagctggtctcatcagaggggcggttcaaaaacctgagagaggct
ttaaagaattgtgatcctccctgtgtgccatatctggggatgtaccttaccgacctggct
ttcattgaggagggaacgccgaactacaccgaagacaacttggtcaacttctcaaagatg
agaatgatttctcacatcatcagagaaatcaggcagtttcagcaaacagcatacaagatt
gacctgcaaccaaaggtagcccagtatctactggataatagttttgttctggatgaagag
agcatgtacgaagcctcactcagaattgagcccaaagtgctgaactga
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