Trematomus bernacchii (emerald rockcod): 117491372
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Entry
117491372 CDS
T09643
Symbol
carmil2
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117491372 (carmil2)
Membrane trafficking [BR:
tben04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117491372 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Carm_PH
CARMIL_C
LRR_6
Motif
Other DBs
NCBI-GeneID:
117491372
NCBI-ProteinID:
XP_033997203
LinkDB
All DBs
Position
Unknown
AA seq
1852 aa
AA seq
DB search
MDSVSQNLKDEISELLNPHRVCLVTPVILHPPTQTCGRSASRFVVLSLWRGYLFNNKPPV
RMESTFSYLEICSINIHSLTQVVLETDRQTLSFSVLHVEDLEAMVCHMTASLKRIFPDSS
PGKLLKTVPADLQQRILTLTDEIEEQLSSRPGSCGGFSDTYAALCDFNEMPFREEIQWDI
DNIYYMNNWREFNLQDFSHVDSRDLALAVAALSFNQWFTKIYSKELKLSVDIQQQLTFLL
SRSPSLEELSLEASGLKMDFALKMAAALREHPSSTLQSINLSGNPLEDKGVIALSQELGS
LAGGLRLLSLSRVSMTARGAGCLSQVLSSTQLFSASLTHLDLSANPDIMGTEEATFLFKF
LSSTNSLSHLDLSDTSCPLDTLFVSLSAGCCFKLMHLNLARNPFSHRKVREVTRSIGQFF
SQSCELKYVGLSATKLPPQALRLLLQGLATNILLLGLELDISSCELRSAGAQVIQEHISE
VTAITSLDISDNGFESDMVTLVLSVGRCLSLRHLALGRNFAMKSRPLTDVLHRIAQLIQD
EECPLQSLSVRDSKLKAGMHILLSALGGHAALTEVDISGNNIGDTGAKMLAKALLTNTTL
RTLSWDRNNVTARGFQDVADALERKLHLQQVSGLADITQSYRXQPDRTEEALHKVSVCLF
RQKNQRQSDRVEIQQVFKAQQSEMQVQGLVXQLEDSLQRLNPCNPQEVQAEVLTAQEVLH
NARESFKLLPALYEEGRKAAPDGGLVNCILTDAAAALADEINRSIQTLGSSVLLCSRVWL
KPDEGGRGGACPWVVQRSSVCEGLSVCVQKKQTDTTFLRSTLVENTGQIISNEFRDLRQT
LSVSLAESIMEQVQQDLIKAQDRVNFLLKENPCTSLKLNIPELRLIDSDFPTDDYSPACW
XNSFHSKSLRPAASIKSLLDADWEQQIRGGGAREEGGGGWCGLPLLSTATPMSVRSPSPS
PSPSPSPPGMRGRRRREGEAAAALDAAAARGASFIPPPSPPLLRSISPRSAEEEAAGRGP
LPRRQAPFPGCKPSPGALLSSGPPXFPMEPLPTQGQTLRHYTASRPRPRRTHTQPPSSRP
QEPVLKVEPENEAHRGVGRVDEGVEEFFTKKIIPDYALKGRWEESIPAPATTPDSSSTPS
ASTPFSSSSDNITLSPSTTVTSPSVPSTDTCFTSTDVPLLSTSSTPPAPPSSVTPTTTLP
TKNIKKKFGDFFAFKRARGGRAPKAGGGEGGGEGVKVKRTSIADLIRPLREAKERDRDKG
RGARSVEDANVCNDAATTEGTAAPGQHPAGDAKGTMAPAKTLTMTMPSSDNTPSFPNTAT
SPDLTTATLSNLTGEAVPLLPGRPPSPVVTSPLTEQERGGVQMKEMLGGSPFGERRLKVT
KRSLREGKSQSLILLTGLEPEDKDDTHSKKHSSESTSSLNRGFRXCCHRMGVAKTPPADT
KTSQNKDEELRKANSEGAILDKPVPPPTYMKPRTMSTSSADPRHPMRALDPIRPDPPIHP
KPTVHERPGGPLPPKPAVAAKPPLPTPASPAGGAARPSSAPPHSSSAGRVQLRHIHDGRL
SDTTAQNGSQERPPGAASALSPRKELLPSAPSAWRGPGTQERSEKAQSVTDESLPKTRQH
LKPVLKRRAVSVHEDTLAMTQELKAVLQRSPIRFRGSRGDLPPCTEDPPCVEEAQRAQEA
GHAGKQEEKRKTAQDEEELKTERGRMGCGAETKPPPPGSACPSSTEASAARLFSPTAASD
RPPPVLERLTHGLQKPSVTPPSEQKSPSTGPRFPQTLEKRLLSPPSQEKTPGTISAISES
QENPQVSPLSLKKKSPGTAPPPEEGRNSTQEELSKQHTVKAADQRTEPPLSE
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggactccgtctctcagaacctgaaagatgagatctctgagctgctgaatcctcacaga
gtgtgtctagtgactcctgtcatcctccacccccccactcagacatgtgggaggtcggcc
agcaggtttgtggttctgagtctgtggagaggttacctgtttaacaacaagccacctgtc
aggatggagagcaccttcagctacttggagatttgctccatcaacattcacagtctcact
caggttgtgttggagacagaccggcagactctgtccttcagtgttttgcatgttgaggat
ctggaggccatggtgtgtcacatgactgcctctctgaagaggatcttccccgactcttct
ccaggaaagctgctgaagacggttcctgcagatctgcagcagagaatcctcaccctgacg
gatgagatcgaggagcagctgagcagccggccgggctcctgtggaggattctctgatacc
tacgctgctctgtgtgacttcaacgagatgccgttcagagaggagatccagtgggatatt
gacaacatctactacatgaacaactggagagagttcaacctgcaggacttcagccacgta
gacagcagagacttggcattagcagtagcagctctgtctttcaaccagtggtttaccaag
atctacagcaaggagctcaaactgtcagtggacatccagcagcagctaaccttcctgctg
tccagatcccccagcctggaggagctctcactggaggccagcggactcaaaatggacttt
gcattaaagatggccgctgccctgcgggagcacccctcctccaccctgcaatccatcaac
ctctcaggcaaccccctggaggacaaaggtgtcatagctctcagtcaggagctggggagt
ctagctggaggactcagactcctctctctgtcccgggtatcaatgactgctagaggtgct
ggatgtctgagtcaggtgttgtcctccactcagctgttctcagcgtctctgactcacctc
gacctgtctgctaaccccgacatcatgggcaccgaggaggccacgttcctcttcaagttc
ctgtccagtactaactctctgtctcatctggacctcagtgataccagctgccctctggac
acgttatttgtttcgctgtctgctggatgctgtttcaaactgatgcacctcaacctggcc
aggaatcctttcagccacaggaaggtgcgggaggtaaccaggagcattgggcagttcttc
agtcagagctgtgagttaaaatatgtcggcctgtctgcaaccaaactacctccacaagct
ctcaggttattactacagggtctggccaccaacattcttctattaggtttagagttggac
atcagcagctgtgagcttcgttcagcaggtgctcaagtgatacaggagcacatctctgaa
gttacagctatcacaagtctggatatctctgacaatggttttgagagtgacatggtgact
ctggttctgtctgtgggtcgatgtctctctctccggcacctcgcactgggaagaaacttt
gccatgaagtccagacctctcactgatgttcttcatcgtatagctcaactcattcaggat
gaagagtgtcccctgcagtctctctcagtgagggactctaagctgaaggcagggatgcac
atcctgctgagcgccctgggggggcacgctgctctgactgaggtggacatcagtggaaac
aacattggagacactggagccaaaatgctggccaaagccctgttgacaaacaccacactc
aggactctatcatgggacaggaataatgttactgcaagaggtttccaggatgttgctgat
gccttggagaggaaacttcatctgcagcaggtgtctggcctggctgatatcacacagagt
taccgcnggcaacccgacagaacagaagaggccctgcacaaggtcagtgtgtgtttgttt
agacagaaaaaccagagacaatctgacagagtggaaatccagcaagtgtttaaagctcag
caatctgagatgcaggtccagggtctggtcntgcagttagaggacagccttcagcgttta
aacccctgcaaccctcaggaggtccaggctgaagtcctcacagcacaggaggttctgcac
aacgccagggagtccttcaagctgcttcccgctctgtatgaggaaggcaggaaggctgcc
cctgatggaggactggtgaactgcatcctcactgatgcagctgcagcactggctgatgag
atcaacagaagcatacagacgctggggtcatcagtccttctgtgttccagggtctggctg
aagcctgatgagggggggcggggaggggcgtgtccttgggtggtgcagcgctccagtgtg
tgcgagggtctgtcagtgtgtgtccaaaagaagcagacagacaccactttcctgagaagc
actctggtggagaacacagggcagatcatcagcaacgaattcagagacctcagacagacg
ttgagtgtctctctggctgaaagcatcatggagcaggtgcagcaggatctcataaaggca
caggacagagtgaatttccttttaaaagaaaatccatgcacctctctgaaactgaacatc
ccagagcttcgactgattgacagcgacttcccaactgatgattacagtccagcgtgttgg
nagaacagtttccactccaagagcctgaggcctgccgcttccataaagagtctcctggat
gcagactgggagcagcagatcagaggaggaggtgccagagaagaagggggaggaggatgg
tgcggtctccctctgttgtcgacagcaacccccatgtcagtcaggtctccaagcccctcc
ccgtccccgtcaccctcccccccgggaatgagggggaggaggcggagggagggggaggcg
gcagcagcgttggatgctgcagcagcgagaggagcatcgttcattcctcctcccagcccc
cccctcctgcgctccatctcccctcgctctgcagaggaggaggctgccggccgcggaccc
ttacccagacgacaggctcccttccccggctgcaagcccagcccaggcgctctgctcagc
tctggaccccccngcttcccaatggagcctctacccacccagggacagactctgaggcac
tacacagcctcccgaccgcggccacgacgcacacacacacagcccccgtcctccaggcct
caggagcctgttttaaaggttgagccggagaatgaggcccacaggggagtgggccgagtg
gatgaaggagtagaggagttcttcaccaagaaaatcatccctgactatgcactaaaaggc
cggtgggaggagtcaatccctgccccagccactaccccagactcaagctccaccccctca
gcctcaacccccttttcctcttcgtctgacaatatcaccctctcccccagcaccactgtc
acctctccctctgtcccatccactgacacatgctttacatccactgatgtacccctcctc
tctacatcctccactccccccgcacccccctcttctgtcacccccaccaccacacttccc
accaaaaacatcaagaaaaagtttggcgacttctttgccttcaagagggctcgaggcggc
cgagcccccaaggcaggagggggagagggaggaggagagggggtgaaggtcaaaaggacc
tctatcgcagacctcatccgacccctccgcgaggccaaagagagggacagggacaagggg
agaggggcaaggtcagtggaggatgctaacgtttgtaatgatgccgccaccacagaagga
accgctgccccgggccagcatcctgcaggcgatgcgaagggaacgatggcgcctgccaag
actttaaccatgacgatgccttccagtgacaacactccctctttccccaacaccgccaca
agccccgacctcaccactgccacgctttccaatctgacaggagaggcagttcctctcttg
ccaggtcgcccccccagtcctgtggtcacctcccctctcacggagcaggagaggggcggg
gtgcagatgaaggagatgttgggagggagtccgtttggagagaggagactcaaggtgacc
aagaggtcgctgagggagggaaagagccagagcctcatcctgctgacagggttagagcct
gaagacaaggatgacacacacagtaagaaacattcgtctgagagcacgtctagtttgaac
agaggcttcagatgatgctgccacagaatgggcgtggccaaaactccacctgctgacacc
aagaccagtcagaataaagacgaggagctgagaaaggccaactctgaaggtgctatcctg
gacaagcctgtacctcctcccacatacatgaagcccagaaccatgtccacgtcatcagct
gaccccagacatccaatgagagcgctggaccccatcagaccggacccccctattcaccca
aaacccaccgttcacgagcgcccaggcggccccctgccgcctaaacctgccgtggcagcc
aagcctccccttcccaccccggcctctcctgccgggggggcagcccgtccctcctccgct
cccccccacagcagctcagcagggagggtgcagctcagacacatccatgacggccggctg
agcgatactacagcacagaacggcagccaggagcggcccccgggtgcagcctccgctctg
tcccccaggaaggagctgctcccctctgctccgtctgcctggagggggcccggcacacag
gagcgttcggagaaagcacagtcagtgaccgacgagagtcttcctaagacacggcaacac
ttgaagcccgttctgaaacgcagagctgtgtcggtccatgaggacactctggccatgacg
caagagctgaaggcggtgctgcagaggtctcctatccgtttccgcggctccagaggagac
ctgcccccctgcactgaagaccctccctgtgtggaggaagcacagagagctcaggaggcc
ggtcacgcagggaaacaagaagagaagaggaagactgcccaggatgaagaggagctgaag
acagagagaggcaggatgggctgtggagctgaaactaagcccccccccccaggctcagcg
tgtccctcctccacagaagcatcagcagcccgactcttcagtccaactgcagcctccgac
agacccccacccgtcctggagaggctgacccacggcctccaaaagccctctgtaacaccc
ccatctgagcagaagagccccagcacaggcccccgtttccctcaaactctagaaaaacgg
ctactgtccccaccctcccaagaaaagacccccggcacaatctcagctatatctgaatcc
caagaaaacccgcaagttagccccttgtccctcaagaagaaaagccctggcacagccccc
cccccagaggaggggaggaacagcacacaggaggagctctctaaacagcacacagtgaag
gcagcagaccaaagaactgagccccctctgtctgaataa
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integrated database retrieval system
