Trematomus bernacchii (emerald rockcod): 117491385
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Entry
117491385 CDS
T09643
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117491385 (dennd4a)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117491385 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
117491385
NCBI-ProteinID:
XP_033997233
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MMEDKGPRVADYFVVAGFTDSSKPLEDELHFDDAGPKSVKPNAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNAASLRGPQIFLCFKRGRDKPPLTDLGILYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAAKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATV
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPFSEEDLSERQRSQLGMPSSDLGS
DGSRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPSI
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSCPCPFIVGVDSRYFDLYVPP
SDISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNTLNKIYQQLTEGGQLNREDVHME
QTVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSCLLPITQAPSEKTTDASSLFDI
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLYTTGGKMDS
ERPEETRLMELDESHRSEHTVYVNPPELPPLPQGEEHPLCYSYSGFPVLNAELLEPLDGP
NPPSAGMTSRHSSPASPTAIFRRSKQEIKSAQRMAKTYSSMPQMWSKCLLRHCYGLWFIC
LPGFVDTCHSKVRALRTAYDVLRKMQDKNLQAPDEVCYRVLLQLCGQHSQPVLAVKVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLKNVVLGVLQFKRAVKKQQTPH
RDPQLSDGSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERMCTRDSDNTPSVEDKGPRQSTPEIEAAGSSISPSTRNCKPTDIRAVNGFMRVSSPS
SNSSLCGGLPKKERPKSLDLSDGQGSLRLTVPQLGSTKQHHLAADRLHGVEEEEAETDNQ
KPGVERSVSCSGAAERPGGSMERSVSCSAGTASRTGIQKGFDPLSLMSSDAAECNQENGD
TPTARRDLAEEIEMYMNNGNSPLSSRTPSMDLQNPSSPLFRSASSPHTSPRPSTLLRSNT
HLPLPVRSKERLRTSPSLPLGVCTKVRERPSSLVSPSSPTPSSSSSFSMDSLFTPTLDIF
KSSVLSAGKGVAEKASRFYSRLSSQTSLTQDANSDRISVCSLASGEADCSSLLDHDSCLD
PDGFTSPQHGSVSRLRRSPVVGHANLGSPSTPDRVFRHNSFSGGLALPFKTPHTPDSSPD
TRCFQPTPNYTIEVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFL
NVEIKDLRPHSRSSKESNPVTEEVTSATLNPETKKSSSDDAAQSSKGPGQEQGSSERAGS
PPVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDHHPIVFWNLVWYFRRLELPSNLPA
LILASQHCSHGDQTPQSVSYEDSKQVLVRIMWDNLKLHKDKVQPCYVLWNSHCANSLVRS
GLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQIIQLLGPELGFKRQRSLYRDLLFLALVA
LGKNNININAFDREYKLAYDRLTPNQVKLTHNCDRPPGAGVMECRKTFGEPSL
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaggggcctcgtgtagccgactactttgtggttgccggtttcaccgac
tcatccaagcctctggaggacgagctccactttgatgatgccggtcccaagtctgtgaaa
ccaaacgcccccatcaccgacgtagctgtggtgatccgctccctgggtgaagaggtgccc
ccgggtttcacctgtgttgaaagcaccccctcaggcctctctgcagagctcaatgcagcc
agcctcaggggccctcagatattcctgtgcttcaaacgaggcagagataagcccccactg
acagatcttgggattctgtatgagtggaaagagaaactgaaacctggatgtcacatcgtc
cagaccacaccctcaggtcgccccgccaacatcagcagctcctcgtcacagcgcatctac
atcacctaccgccgtgcagccaagagccagcctcacacctcactggccgtcactgatgtc
tgcatcatcatccccggcaagggggagacgcccccccacaccttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcctcagtctacctttgttacaagaagtctctggct
aaagcgaacacaatcgcatacaaagcaggtctgctgtgtaggtaccctgaagaggactat
gagtccttcccactgcccgagtccgtgcctatgttctgcctgcccatgggggcaacggtc
gagtgttggccagcacacaccaaacactccctgcctgttttttccacatttgtactgacg
ggtgcctctggagaaaaggtgtacggagcggccatccagttctatgagcctttctcagag
gaggatctgtctgagcgtcagcgctcgcagctcggcatgccaagctctgatctggggtct
gatgggagccggagtgtttacagcaacaagagcatctgtctgctctcccactggcctttc
ttccagtccttcaggagctttctcactttcctctacagatactccatctctggcccacat
gccctgcctattgaaaagcacatctctcacttcatgcaaaatgtgccattcccctcgatt
cagagaccacgcatcctagtgcagctgtctccacatgacagtctgatgctgagccaacct
gtgtcctctccactgcctctcagtggtgggagtctgtccacattactgctgaatctgggc
ccgaagaatgcagccactctgctggtgctggccgtcaccgagcacaagatcctggttcac
tccctgcgcccagctgtgctcacaagtgttacagaggccctcgtgtctatgatcttcccc
ttccactggccgtgcccgtacatccctctgtgcccgctggctctggccggtgtgctaagt
tgtccttgccctttcattgtgggtgtggactctcgatactttgacctttatgtgccccca
tctgacatcagctgcgtggatctggacacaaacacaatctcccaaaaagacgacaagaag
gctttaacgtggaaaatcttgcccaggagagcctgtaaacatcttctgaataccctgaat
aagatctatcagcagctcactgagggtggtcagctgaaccgtgaggatgtgcatatggag
cagacagtgactgacagtgagctcaacggggggaagagcctccacactctggaactggag
atccaggaggccttcctgcgtttcatggcagccatcctgcgaggctaccgctcctgcctg
ctgcccatcacacaagccccctctgaaaagaccaccgatgccagttccctcttcgacata
caaggttttctcaagagcagagaccgctcccaccaaaggttttactccctcatgacaaag
actcaaatgttcagccgtttcatagaggagtgctctttcgtcagtgataaagacgccagc
ctggccttctttgatgagtgtgttgataagctatacaccactggaggcaagatggacagt
gagcgaccagaggaaaccagactgatggagctagatgaatcccaccgcagcgagcacacg
gtgtacgtcaaccctccggagctgcccccactaccacagggagaggagcatcctctgtgc
tatagctactctggattccctgtgctgaacgctgagctactggagccgctggatggacca
aatcctccttcagccggcatgacctcgcgtcacagcagcccagccagccccacggccatc
ttcaggcgctctaagcaggagatcaaatcagctcaaaggatggccaaaacctattcctca
atgcctcagatgtggtccaagtgtctgctgcgccactgctatggcctctggttcatctgc
ctcccaggctttgttgacacctgtcactcaaaggtgcgggctctgcgtacagcttacgat
gtgctgaggaaaatgcaggacaagaatttgcaggctccagatgaggtgtgttaccgtgtg
ctgctgcagctgtgtgggcagcacagccagccagtcctcgctgtcaaggtgttgtttgag
atgaagaaagctggagttcaacccaacgccatcacctatgggtactacaacaaggcggtg
ttggagagcacgtggccctccaccaccagaggaggatactttctgtggggaaagctgaag
aacgtggtcctaggtgtgctccagttcaagcgagcggtgaaaaaacaacagacgccgcac
agagatcctcagctttcagacggcagtgatcttgacacagtcagtcatggcagtttggac
agtgctaatgactctgctgagcgcacatccattgacacggacttcactaaaatggactcc
agtgatgatggatttagtacaggtggacagtcagaccaaggctacgattcactatccaaa
gaggaagagaggatgtgcaccagagatagtgacaacacaccatcggtggaagacaaagga
ccgaggcagtccacacctgagattgaggctgcaggcagcagcatctctccttctacaaga
aactgcaagccaacagatatcagagcagtcaatggcttcatgcgggtttccagtccatct
agtaacagcagtctttgtggaggtctgccaaagaaagagaggccaaaatctcttgatttg
tcagatggacaaggaagtctaaggctaaccgtccctcaactagggtcaacaaagcagcat
cacctagctgctgacagactgcacggtgtagaagaagaagaggcagagactgataatcag
aaacctggtgtggagagaagtgtcagctgcagcggtgcagcggagaggccaggagggtcc
atggagaggagtgtcagctgcagtgctgggacagcgagcagaacaggaatccagaagggc
tttgatcccctgtcactgatgtcctccgatgccgcagagtgcaatcaggagaatggagac
acgcccacggcccgacgcgacctcgccgaggagattgagatgtacatgaataatggcaac
agtcccctgagcagccgcacccccagcatggacctgcagaacccctcgagccctttgttt
cgctccgcctcgtcgcctcacacctcgcctagaccctccaccttgctgcgctccaacacg
cacctcccgctgcctgtcaggtccaaagagaggctgaggacgtcgccctctcttcccctg
ggtgtttgtaccaaagtcagggagaggccttcatccttggtgtccccgtcctcacctact
ccctcctcctcctcatcgttctccatggactctctgttcaccccaactcttgacatcttc
aagagcagcgtgttatcagcagggaagggcgtggctgagaaggccagtcgcttctactcc
cgtctgtcctcacagacttcattgacacaggatgcaaacagtgaccggataagtgtctgc
tcactggcgtcaggagaggcggactgctcctcactgcttgatcatgactcctgtctggac
ccagacggcttcacctccccccagcacggcagcgtgtcccgcctcaggaggagcccggtt
gtaggtcatgccaacctgggcagccccagcacccctgacagagtgttcagacacaactcc
ttctcaggtggtttggcacttccttttaaaactcctcacactccagattcctcccccgac
accagatgcttccaacccactcccaactacaccatagaggtgctgatgtccagctgttca
ctctgtaagacgtgtgactgtctggtctacgacgaggagataatggccggatggacagca
aacgactccaacctgaacagcacctgtcctttctgtggcacagctttcctgcctttcctc
aatgtagaaatcaaagacctgagaccacacagcaggtcttctaaggagagtaaccctgtt
acagaggaagtcacttcagcgactctcaatcccgagaccaaaaagtcttcttcagacgat
gcagctcagtcctctaaaggtcccgggcaagaacaggggagcagcgagagggcagggtcg
cccccggtgacggtgccctacctgagtcctctggtcctgtggaaagagctggagagcctg
ctggtgaacgagggcgaccaggccatctcctccccgagtgttgtggaccatcaccccatc
gtcttctggaacctggtgtggtacttcaggaggctggagctgcccagtaacctgcccgct
ctcatcctcgcctcccagcactgtagccacggagaccagactcctcagagcgtttcatac
gaggacagtaagcaggtgcttgtgaggataatgtgggacaacctgaagttgcacaaagac
aaagtccaaccctgctatgtcctgtggaactcacattgtgcaaactccctggttcgctct
ggtctgtgtgaagaagggcagctctttactgtggagctcctgcagggttttgtgaggagc
atcaagaaaagtgatgtctatcagccaatgagccagatcattcagctgctggggccagag
ctgggcttcaaaagacagaggagcctgtaccgagacttactgttcctcgctctggtggct
ttgggaaagaacaacattaatatcaatgcttttgaccgggagtacaagttggcatatgat
cgcctcacccccaaccaggtaaaactgacacacaactgtgaccggcccccgggagcagga
gtcatggagtgcaggaagacttttggggagcccagtctgtaa
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integrated database retrieval system
