Trematomus bernacchii (emerald rockcod): 117491392
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Entry
117491392 CDS
T09643
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 14 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117491392 (lrrc29)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117491392 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_At5g56370
F-box-like
F-box_5
LRR_At1g61320_AtMIF1
F-box
SAM_Ste50p
LRR_8
Motif
Other DBs
NCBI-GeneID:
117491392
NCBI-ProteinID:
XP_033997242
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MEDCNGEDIIATPELPLEIIVYIQSFLQASDRKDASLVCRSWYYASQDFHFQKNLTFSFP
ASASSLELIKGLGRKSRCSLIIKQLDGFSMSRSLLMEVGLCLGSKLESLALPGSSITEAS
LLSLLPRLTSLRRLDLRGLDSLFMSGAFLSREEHRHQVRSALSGLEELDLSDLRYLSDLT
FNRLTSCTPGLRRLSLAGCHIAFEFDPYRGCPAGAVKDSSALLSLRNLKRLVTEQRWTLV
ALDLSRTSITPDSLRTVAQVPDLVLEELRLHGCKELTDYSIEVLVKHQPSLQRLDISACT
ELTSRSVEAVAQGLKALTQLSLSRDWRITEKGLAELLSVSSLRSLDLSECLHVSGTEIVK
GLTGCTTARAQLDTLSLKSCTYIRDFAVFSLTQLLGNTLRELDLTLCVNVTDLSVRAIAT
YLQGLVVLRLGLCKEITDWGLLGMVEATKCEPDQETADKGPRFTRTFGNMGFFKPPRLPF
DEKPKLVTHNDLQQFKQQAGASLLALNRLQELDLSACPKLTDSSITQVLRYPDLRRLSLS
MLPEITDASLASVACHCRSLTSLALSHCPGISDRGVAQAAPYLHRLQHLYLSGCSNITDR
SLFLLLQHCDRLQTLDISSCKNISPTTVDLLQSRLPFLENVHHKFIETRSCYRKK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagactgcaatggggaggacattatagcaacacctgagctacctctggagatcata
gtttacatccagagctttcttcaagcttcagacaggaaggatgcctcgctggtctgccgc
agctggtactacgccagtcaggacttccactttcagaagaacctcaccttcagcttcccg
gcttcagcctcgtccctggagctgatcaagggtctgggcaggaagtcccgctgcagtctg
attatcaaacagctcgatgggttcagcatgtccaggtcactgctcatggaggtgggtctg
tgtttgggctctaagctggagagcttggccctgcccggcagcagtataacagaggcctct
ctgctgagcctcctcccccgcctcacctccctccgcaggctggacctcaggggtctggac
agcctcttcatgtctggggctttcctctccagagaggagcacagacaccaggtgaggtca
gctctgtctggtctggaggagctggacctgtccgacctgcgctacctctccgacctcacc
ttcaaccggctcaccagctgtacccccggcctacgccgcctctcgctggccggctgccat
atcgcctttgagttcgacccgtatcgagggtgcccagcgggggctgttaaggattcgtca
gcactgctgtcactgaggaacttgaagaggttggtaacggagcagagatggactctcgta
gctttggacctcagcagaacctccatcacacccgattcactacgcactgttgcacaggtt
ccagatttggtcttagaggaactgcgtctgcacggctgtaaggagctgaccgattactca
atagaagttctggtgaagcaccagccgagcctccagaggctggacatcagtgcctgcacg
gagctgaccagcaggtctgtggaggccgtagctcagggcctgaaggcactgacacagctc
tctctgtcccgcgactggaggatcactgaaaaaggcctcgctgaattactgtcagtgtcc
tccctgaggagtctggacctgtctgagtgtctgcacgtcagcgggacagagatagtgaaa
ggcctgacaggatgcaccactgcccgagcacagctggacacactgagcctcaagagctgc
acctacatacgggattttgcagttttctctctcacacagcttctggggaataccctccgt
gagctggacttgacattgtgtgttaatgtgactgacctgtctgtgcgagctatagccact
tacctgcagggcctggtggttctgcggctgggcttgtgtaaagaaatcacagattggggt
ctgctggggatggtggaagcaaccaaatgtgagccggaccaggagacggcagataagggt
ccgagattcacccggactttcggcaacatgggtttcttcaagcctccgcgtttacccttt
gatgagaaacccaagctggtgacgcataatgacctgcagcagttcaagcagcaggctgga
gcgtctctgttagctctgaacaggctgcaggagctggacctctccgcctgccccaagctc
accgacagcagcatcacccaggtgctgcgttacccagacctgcgccgcctgtcgctctcc
atgctgccggagatcacggacgccagcttggcctcggtggcctgtcactgccgcagcctc
accagcctggccctgagccactgcccgggcatcagcgaccgcggagtggctcaagctgca
ccgtacctccaccggctgcagcacctctacctctccggctgcagcaacatcactgacagg
tctctgttcctcctgctgcagcactgtgaccgtctgcaaacactcgacatctcaagttgc
aaaaacatctccccaacaacggtggacctccttcaatccaggctgcccttcttggagaat
gtccaccacaaattcatagaaacaaggtcctgttatcgtaaaaagtaa
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