Trematomus bernacchii (emerald rockcod): 117491416
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Entry
117491416 CDS
T09643
Name
(RefSeq) very long-chain acyl-CoA synthetase-like isoform X1
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03320
PPAR signaling pathway
tben04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117491416
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117491416
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tben01004
]
117491416
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117491416
Enzymes [BR:
tben01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117491416
Lipid biosynthesis proteins [BR:
tben01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117491416
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
117491416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117491416
NCBI-ProteinID:
XP_033997275
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MLVWIVFAAVGLLALFFRNPHFFRDVQFVRKKLKTTSRILKYMQTNYSILDRFIDAEKEH
PHKPFILFGDETFTYRDAEELSNKAARVFLQSGLLKQGDTVALFLGNEPVFLWLWLGLVK
IGCSAAFLNCNIRSKSLLHCFKCSGARTLVAAEELQDAVDEVLPALLEQQVTVFILTDRC
QTADVKSFKDQMSQASSEPLSKDLRSHLTLRSPAAYIYTSGTTGFPKAAVISHAKLWQVA
CFPSLAGMNSDDVLYISLPLYHTAGFLGFASAIDRGITVALRSKFSVSQFWNDCRKYDVT
VIQYIGEIMRYLCNTPKKPNDRSHKVRLAVGNGIRADVWRDFISRFGNVKIREFYGATEG
NFGLINYSGKIGAVGRDSFLHRVNSQVSFHIMRLKLLINEQCFGFTFLSFILQRYFPHAV
IRFDVETETPLRDSSGLCIEAAKGEPGLLVSEISLMAPFSGYMGDLQQSEKKRLHDVLRK
GDLYFNTGDLLRIEEDNFIYFQDRVGDTFRWKGENVATTEVADVITMVDCIKEANVYGVE
VPGHEGRAGMAAINLTEGLRFDSAAVFKHVENFLPAYARPRFLRIQSSLDVTGTFKHLKM
KLVAEGFNPNQITDPLYFLDEKDKSYVPLTVDKFNLITSGQIKM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtctggatagtgtttgccgcggtgggtcttctcgccctatttttccgcaatccg
cactttttccgggatgtccaattcgtgcgtaaaaagttgaaaacgacgagccgcatcctg
aaatacatgcagaccaactactccatactggatcggttcatagacgcagagaaggagcac
ccacacaagccgttcatcctgtttggagatgagacctttacctaccgggacgcggaggag
ctcagtaacaaggcggcccgggtgttcctgcagagcggcctgctgaagcaaggagacacg
gtcgcgctgttcctcggaaatgagcccgtgtttctgtggctgtggctgggtttggtgaag
atcggatgttccgctgctttcctcaactgcaacatcagatccaagtccctgttacactgc
ttcaagtgcagcggagccaggactctggtcgctgcggaagagttacaggatgctgtggat
gaggtcttgcccgctctgttggagcagcaggtcactgtgttcatcctgactgacagatgc
cagactgcagatgtgaagagcttcaaagatcaaatgagccaggcctcctctgagccgctg
tccaaggatttaaggtcacatttaaccctgcggagtccagcagcctacatttacacatcc
gggacaacaggtttccctaaagcagctgtgatctctcatgccaaactgtggcaagtagcc
tgcttcccatctctagcaggaatgaactctgatgatgtgctttatatcagcctccctctt
tatcacaccgccggcttccttggatttgcttcagctattgacagaggtatcacagtggct
ttgaggagtaagttctctgtgtcgcagttctggaacgactgcaggaaatatgacgtcacc
gtcatacagtacataggggaaatcatgcgttacttgtgcaacacaccaaagaaacctaat
gatcgaagccacaaagtgagacttgcagtaggcaacgggatcagagccgatgtttggagg
gacttcatcagcaggtttggaaacgttaaaatcagagagttttatggagcgactgaaggg
aattttggtctgataaattacagcggcaagatcggggctgtgggccgagactccttcctc
catagggtaaattcccaggtttcatttcacattatgaggttaaagcttttaatcaatgag
caatgttttggctttacttttctttcttttatcttgcagagatactttccacacgctgtg
atcagattcgacgttgaaacagaaacacctctgagggactcctctggtttatgcatagag
gctgccaaaggtgagcctggactcttggtttctgaaatatccttgatggctccattctcg
gggtatatgggagacctgcagcagtctgagaagaagaggctgcatgacgtcctgaggaaa
ggagacttgtacttcaacactggtgacctgctgcgcattgaggaggataacttcatctac
tttcaggatcgagtgggagacactttcagatggaaaggagagaacgtggctacaactgag
gtggctgacgtgatcacgatggttgactgcattaaagaagccaacgtttatggagtggaa
gtgccaggtcatgaggggagagcaggaatggctgccattaacttaactgaaggactcaga
tttgactcggcagctgttttcaaacatgttgaaaacttcctgccggcctacgcaaggcca
cgattcctgaggattcagagctccttggatgttacaggcacatttaagcatttgaagatg
aagctggtggcggagggtttcaacccaaatcaaatcaccgacccgctctactttctggat
gaaaaagacaagagttacgtcccacttaccgtggacaaatttaacttgatcacatcaggc
cagatcaaaatgtaa
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