Trematomus bernacchii (emerald rockcod): 117491477
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Entry
117491477 CDS
T09643
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04115
p53 signaling pathway
tben04120
Ubiquitin mediated proteolysis
tben04137
Mitophagy - animal
tben04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117491477 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117491477 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117491477 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
117491477 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117491477 (siah1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117491477 (siah1)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117491477 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
117491477
NCBI-ProteinID:
XP_033997374
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MLPKRWTRRKKCDPLFCGVFWEATATVLFPWKRPEKYGVEGLRERSTPMSLVQVKSKPAS
VALQAPPWNSLFRLFSCVATRSVHRTKEVPTFQEKTTALFGNLMDEADSISFDVDVSEVN
SQGLREMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQ
CQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDK
TEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPG
AVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRL
TWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctaaacgttggacgagaaggaagaaatgtgatcctctgttttgtggtgtgttt
tgggaagctacagcaacagtgctgtttccatggaaaaggccagagaaatatggagtcgag
gggctgcgtgagcgctctacccctatgtctctggtccaagtgaaatcaaagccagctagc
gtagccctgcaagctccgccctggaattccttgttcagactcttctcatgtgtagccaca
aggagcgtgcacaggactaaagaggtccccacatttcaagagaagacgaccgccttattt
ggaaatcttatggacgaagccgattccatcagttttgatgtagatgtgtcagaggtaaac
agccagggacttagagaaatgagtcgccagactgccactgcgctgcccactggaacctcc
aagtgccccccctcccagcgcgtccccaccctgtcaggcaccacggcctccaacagcgac
ctggccagcctgttcgagtgccccgtctgcttcgactatgtgctcccccccatcctgcag
tgccagtccggacacctggtatgctcgaactgccggcccaagctcacctgctgccccacc
tgccgggggcccctgggctccatcaggaacctggccatggagaaggtggccaactcggtc
ctcttcccctgcaagtacgcctcgtcgggctgcgaggtcaccctgccccacacggacaag
acggagcacgaagagctctgcgagttccggccgtactcctgcccctgccccggggcctcc
tgcaagtggcagggctccctggacgccgtcatgccccacctgatgcaccagcacaagtcc
atcaccacgctgcagggggaggacatagtgttcctggccacggacatcaacctgccgggc
gccgtggactgggtgatgatgcagtcctgcttcggcttccacttcatgctggtgctggag
aagcaggagaagtacgacggccaccagcagttcttcgccatcgtgcagctcatcgggacc
cgcaagcaggcggagaacttcgcctaccggctggagctcaacgggcaccggcgccgcctc
acctgggaggcgacgccgcgctccatccacgagggcatcgccacggccatcatgaacagc
gactgcctggtgttcgacacgtccatcgcacagctgttcgcagagaacggcaacctgggg
atcaacgtcaccatctccatgtgctaa
DBGET
integrated database retrieval system
