Trematomus bernacchii (emerald rockcod): 117491621
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Entry
117491621 CDS
T09643
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
KO
K12183
ESCRT-I complex subunit TSG101
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03250
Viral life cycle - HIV-1
tben03272
Virion - Hepatitis viruses
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117491621 (tsg101a)
03272 Virion - Hepatitis viruses
117491621 (tsg101a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117491621 (tsg101a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117491621 (tsg101a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117491621 (tsg101a)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
117491621 (tsg101a)
Exosome [BR:
tben04147
]
Exosomal proteins
Proteins found in most exosomes
117491621 (tsg101a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF3450
Het-C
UQ_con
Xpo1
FapA
SlyX
Exonuc_VII_L
Prominin
TPR_IF140_C
FlaC_arch
DUF5685
Spc7
EMP24_GP25L
CCDC90-like
DUF724
APG6_N
Seryl_tRNA_N
S6OS1
Spc24
Motif
Other DBs
NCBI-GeneID:
117491621
NCBI-ProteinID:
XP_033997583
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MAVVNDGVLKKMLKQYKYRDLTVREITNVISQYKDLKPLMDAYVFNDGSTRDLLSLTGTV
PVSYRGNTYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQAPYQAFQAAGPPNPSYMPGMPAVSPYSPNPN
PGGYPGYQYPGGNSYPATAGPAHYPNQTPVSTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEDMVSRLDQEVSEVDRNIELLKRKDEELSE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgtcaacgacggtgttctgaagaaaatgctaaagcaatacaagtacagggac
ctgacagttcgtgagataaccaatgtcatcagccagtacaaggacttgaagccgttgatg
gacgcttatgtgtttaatgatggctccacacgagacctattgagcttgacaggaactgtt
ccagtgagctacagaggaaacacctacaacatcccagtgtgtctgtggttgctggacaca
tatccctacaaccctcccatatgttttgtcaaacctaccagtgccatgatgatcaaaact
ggcaagcacatcgacgccaacggcaagatctacctgccttatctacatgagtggaaacat
cctcagtcggacctgtatggtctgattcaggtgatgatcgtggtttttggagaggagcct
cctgtgttttctcggcccacaacacaagcaccatatcaggcgttccaagcagctggaccc
cctaacccttcctatatgcctggcatgcctgcggtctcaccctacagcccaaatcctaac
ccgggaggctacccaggataccaatacccaggaggcaactcctacccagccactgctggc
cctgcacactaccccaaccagaccccagtttccacagtgggcccgagcagagatggcacc
attggcgaggacaccattcgtgcctctctgatttcagctgtgagtgacaagcttcgctgg
agaatgaaggaggagatggacagagctcaggcggagctggacgccctgaagagaaccgag
gaggatctgaagaaaggacatcagaaactggaggacatggtctcgaggctggaccaggaa
gtgtccgaggttgacaggaatatcgagttgctgaagagaaaggacgaggagctgagtgag
gccttggagaagatggagaaccagtcggagaacaacgacattgacgacgtcatcgtgccc
accgctccgctgtacaaacagatcctgaacctgtatgctgaggagaatgcgattgaagac
actatcttctacctaggagaggccctccgcaggggcgtcatagacctggaggtttttctt
aagcatgtacgccttctgtccaggaagcagttccagcttcgtgcgctcatgcagaaagcc
cgcaagactgccggccttagtgacctctactga
DBGET
integrated database retrieval system
