Trematomus bernacchii (emerald rockcod): 117491678
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Entry
117491678 CDS
T09643
Symbol
nfat5a
Name
(RefSeq) nuclear factor of activated T-cells 5a
KO
K17335
nuclear factor of activated T-cells 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117491678 (nfat5a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117491678 (nfat5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
117491678
NCBI-ProteinID:
XP_033997658
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MPSDFISLLSSDLDLNSPKSLYSKESVYDLLPKELQLQPSSTQTDPPTMSQQSGGEAGPP
PSAAVASDATYSTSSPLASSSLAMGAPSSGSSTSSSDHLKAPQHLHSTGEDGAAEIQGME
GAVSAPSRGANTAAGDIGSAVLSGPGVQQPQNTPSKRRPVLNISPPPEDLFDDSQMSCQE
EPSVSAPTGPDSEHSSSMWADDSVSNFSLISSVSYNDNTEVPRKSRKRTPRQRPGPKPAH
PEDSMDVFDADSAKAPHFVLSQLSTDKTSPSSLESGTAVKGGSLSTQYPQRSDGKELKIL
VQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGVNEPVVLQVFVANDAGRVKPHGFYQ
ACRVTGRNTTACKEVDIEGTTVIEIPLEPSSDMTLAVDRVGILKLRNADVEARIGLAGSK
KKSTRARLAFRVNIPQPDGSVLTLQVTSSPILCTQPAGVPEILKKSLHSCSARGGDEVFI
IGKNFLKGTKVIFQENIADDNSWQAEAKIDMDLFHQNHLIVTVPPFQSQSITSPVSVGIY
VMTNAGRSHEAQPFTYTPDSADNSEARTIKTEGPSLVSTCIFDCQIKSISPEQTDSSVPP
SKRQEDTPMEVSSNPTPTDVFKPSPDPLVVVQQTLELSSNPHPGGESFQSPMPLQPEDVE
LSQVPPVFPSLESLSTIQKQDITPTTSFPVQGDTTIPPVTPEVPQQFLRDPQDSVPPESS
NSSGGVVVLALSQIATPSQPQQSQVPLFPQDGVTQLERAVRELQAGGNTTFQQVLEAAVA
QQQLNSVLYSPTPSADTLQQHVQENMNSLRLGNTDNTLSPQQQLQIQQQQQMQQQQQQMQ
QQQQMQQQMQQQQQMQQQQQQIQQQQQIQQQMQIQQQFQQHPHLQQHQIIGNLQQQGLSN
MQIQQQQQQQQLILQPQDQQQLQQQQIIENIQQQQHLQQNQQQQVLNSIQLQDQQQQNQI
LTNLQQHQLQQQQQQQQQQQQNQALSNLQQQLQEQQVLENLQQHLQAELLQPQIHSAPQV
QQPVSLLQQTGELLTIQTSFPTQPPSHTSPPQQLFQSPRPLAETQSSQQQVQAALLQNTL
TVLTSGSLSSEQQPTGSTLYLSPNPQPQQQQPQLTFISSMETSNSQPQSVAMFQNQPQAQ
LSQMQQQSTPMEQQQSPQQNQQQQPQLPMGQQGSLFQSIQNHSQPNTVPQSQLSQPEQTG
LLLCTTDLSPQAIPPTILFSTQTQGPSQMGSISVGIQLPDPAEPMSFQDQSSSGGGNVSS
AENRQQSLFQEQQPMQVGLSSSSPQSSQPVELFLPQTSLSSLQSSIGSQELNNQAPSPGT
TIFVVQGSVGVVANPGQQPPEQLFQTTVGGNVAPQGQANLFVFGIQNDSPQLLSSSGPTL
AAQGPPQSSSHMQPLLDQPMGQAASTMPPNMHSSLQSTLQAQMQSSLESAMQTNTQTTLQ
SSLQATIETSLPTPMQTNLQTQSSLQNQLQASISASSNMDKFEDILESLQKQ
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgattttatatccctccttagctcggatcttgacctcaattctcctaaatct
ctatattcaaaagagtcggtatatgacctcctccccaaagagctccagctccagccgtcg
tccacccagacagacccacccaccatgagccaacaaagtgggggagaggcgggacctccc
ccctctgcagccgtggcttcagatgccacctattccacctcgagccccttggcctcctcc
tccctggctatgggagccccgtcctctggctcctctacctcctcctcagaccatctcaag
gccccccagcatctccactccactggagaagatggagctgcagagattcaaggtatggag
ggtgctgtgtcggcccccagcagaggagcaaacactgcagcaggagacatagggtcagca
gtgttgtcagggccaggagtccagcagcctcagaacaccccgtccaaacggaggcctgtg
ttgaacatatcccccccgcccgaggacctctttgacgacagccagatgtcctgccaagag
gagccttcagtgtccgctccaacgggtccagactcggagcatagcagcagcatgtgggcc
gacgactctgtctccaacttcagcttgatcagctccgtctcctacaacgacaacacagag
gtgccgcgcaagtctaggaaacgcaccccccgccagcggcctgggcccaaacctgcccat
ccagaggacagcatggacgtgttcgatgctgacagcgcaaaggcccctcactttgtcctg
tcccagctgagcacagacaaaaccagtcccagctctcttgagtcaggaactgcagtgaag
ggtgggtcactgtctactcagtacccccagaggagtgatgggaaggagctgaagatcctg
gtgcagccagagacccagcacagagctcgctatctgaccgagggcagcagaggttctgtc
aaagaccgcactcagcagggattccccactgtcaagttggaaggtgtgaatgaaccagtt
gtgctgcaggtgtttgtagcaaatgatgccggcagagtgaagcctcacggtttctaccag
gcatgcagagtaacagggcgcaacaccactgcctgcaaggaggtggacattgaaggaacc
actgttatcgagatcccgctggagcccagcagtgatatgacactcgcggtggaccgtgta
ggaattttgaagttgcgtaatgcagacgtggaggcccgtatcggtttggcagggtccaag
aagaagagcacacgagccaggctggcgttcagagtcaacatcccccaacctgatggatcc
gtccttactctacaggtcacctcttcacccatcctctgcacccaaccagcaggagtgcca
gagatcctgaagaagagtcttcacagctgctcagcgagaggaggagatgaagtctttatc
atcggaaagaacttcctcaaaggaaccaaagttatttttcaggagaatattgcagatgat
aattcctggcaagctgaggctaagattgacatggaccttttccaccagaaccatttgata
gtgacagtccctccgttccaaagccagtcaatcacttctcccgtttctgtgggaatctac
gtgatgaccaatgctggtagatcacatgaggcccagcccttcacctacactccagactca
gctgataactcagaagcccggacaataaaaacagagggaccctctctagtcagcacgtgt
atatttgattgccagatcaaatctatatctcctgagcaaactgacagctctgttcctcct
tccaaacggcaagaggacacaccaatggaagtgtctagcaatccaactcccacagatgtc
tttaagccatcccctgaccctcttgtcgtggtgcagcagacactggagctcagctctaac
cctcatccaggtggagagtcctttcagagcccaatgcccctacaaccggaagacgtggag
ctctcccaggtgccccctgtctttcctagccttgagtctctcagcaccatacagaagcaa
gacattactcccacaacctcgttcccagtgcagggcgataccacaatcccccctgtaaca
ccagaagtccctcagcaatttctcagagatcctcaagacagcgtacctcctgagagttcc
aatagtagcggaggggttgtagtcttggccttgtcccagatagcgactccctctcagccc
cagcagtcacaggtacccctattcccccaggatggggtgacccagctggagagggcagta
agggagctacaggcgggaggaaacaccaccttccagcaagtgttggaggcggctgtagcc
cagcagcagctcaactctgtgctgtacagccccaccccctctgcagacaccctccagcag
cacgtccaggagaacatgaacagccttagattgggaaacacagataatacactatcacca
cagcaacagctacaaatacaacagcaacagcagatgcaacaacaacaacagcagatgcaa
cagcagcagcagatgcaacagcagatgcaacagcaacaacagatgcaacaacaacaacaa
cagatacaacagcaacaacagatacaacagcagatgcaaatacagcaacagtttcaacag
catccacacctgcagcaacatcaaatcattggtaaccttcagcagcaaggtcttagtaac
atgcagatccaacaacaacaacaacaacaacaacttatattacagccacaagaccagcag
caactgcagcagcagcaaattatagagaatattcagcagcaacaacatctgcagcagaat
cagcaacagcaagtcctcaacagcatccaacttcaggatcagcaacaacaaaatcaaata
cttaccaatttacagcaacatcagctacagcagcagcaacaacaacaacagcagcagcag
caaaatcaagcattgagcaacttgcaacaacaactgcaggagcagcaggtgttggagaat
ttacagcagcaccttcaggcagagttgcttcagccccaaatccactccgctccccaggtc
cagcagccagtgtccctgcttcaacagactggagagctgctcaccattcagaccagcttc
ccaacacagcccccctcccacacatctcccccacagcagctctttcaatcgccgcggccc
ctcgctgagacccagagctcccaacagcaggtccaggctgccctgctccagaacacactg
acagttctgaccagtggcagtctcagctcagagcagcagcctacagggtcaactttgtac
ctgtctccaaaccctcagccccaacaacagcaaccacagctgacattcatctcctccatg
gagacctccaacagccagccccagtctgttgcaatgtttcagaaccaaccccaagctcag
ctttcccagatgcagcagcagagcaccccaatggagcagcagcagtctccacagcagaac
caacaacagcaaccgcagcttccaatgggccagcagggctccctgttccagagtatccag
aaccactcccagcctaacaccgtccctcagagccagctgtcccaacccgagcagaccggt
ctcttgctctgcaccacagatcttagcccccaggctattcccccaactattctcttcagc
acccagacacaaggcccttcccagatggggagcattagcgttggaatccagctgcctgac
ccagcagagcccatgtccttccaggaccagagctcctcaggcggaggaaacgtgtcctcc
gctgagaaccggcagcaaagcctgttccaggaacagcagccaatgcaagtgggactaagt
tccagcagcccgcagagcagtcagcctgtggagctgttcctgcctcagacctctctgtcc
agcctgcagagctctattggctcacaggagctgaacaaccaggctccatcccctggcaca
accatctttgtggtccagggcagtgtgggggtggtagccaaccctggccagcagcccccg
gagcagcttttccagacaacagtgggtggaaacgtggctccacaaggacaggccaatctg
tttgtgtttggcatccagaatgactcgccccagctgctcagttcctccggacccaccctc
gctgctcagggcccgcctcagagctccagtcacatgcagcctctgttggaccagccaatg
ggacaagctgcctccaccatgccacctaacatgcatagcagcttacagagcacccttcag
gcccaaatgcagtcaagcttagagagcgccatgcagacaaacacacaaacaactctgcag
tccagtttacaggcaaccatagagacaagcctgccgactccaatgcagaccaatctacag
acacagagtagcttacagaatcaattgcaggcttcaatatctgcatcgtccaacatggat
aaatttgaggacatactggaaagcctacaaaagcagtga
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integrated database retrieval system
