Trematomus bernacchii (emerald rockcod): 117491695
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Entry
117491695 CDS
T09643
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117491695 (ctcf)
03036 Chromosome and associated proteins [BR:
tben03036
]
117491695 (ctcf)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117491695 (ctcf)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117491695 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2H2_ZN142
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
117491695
NCBI-ProteinID:
XP_033997675
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MLRVNLSMLFKFLPSMDGGPTEVVGVMEVPSIQAVHSQDAMVADLLQQAAEAGGMLEGQG
GVLEQGHGEGMMAANQAHQQLMEAGVGMDGGARIEMMVMDSLDPTLLQMKTEVIDAALGG
AAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSASTVEALQQGTFVDTTAM
PKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEGEAPTEEQDDEEVGNQMLEEVEDE
HIQPQNEDPSWAKDPDYQPPSTANRKFKKGKSSLRYTEGDKDMDVSVYDFEEEQQEGLLS
EVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHL
CGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDY
ASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQ
SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHE
RYALIQHQKSHKNEKRFKCEMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLL
DMHFRRYHDPNFIPTAFVCPKCSKTFTRRNTMARHSENCNGEVDDAENGSPTPKKGRRGR
KRKMRTRRDEDDSEEDHGELDEEDEDEGEGEEEELLQEEEEPEDMELDQAPAAIPVPAPD
EPPVKRKRGRPPKNAPKPPTPSKSAQVSAKAAASAAAIIQVEDESTGAVENIIVKKEEGD
GSAAPLEQEGALTVEGLGLDGAGVETVELVVNEETAAAANGDLTPEMILSMMDR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggtcaatttatccatgctattcaagttcctacccagtatggacggagggcca
acagaggttgtaggggtgatggaggtgccctccatccaggccgttcacagccaggatgcc
atggtggctgacctcctccagcaggctgcagaggccggcggcatgttggagggacaagga
ggagtcctggaacaaggtcacggggaagggatgatggcagccaaccaggcccatcagcag
ctgatggaggctggtgtgggtatggacgggggcgccaggattgaaatgatggttatggac
tccctggatcccaccttgctgcagatgaagactgaggtgatagatgctgcattggggggt
gctgctcaccaagcaactgtaacaacagtggaccagactcaaatcatcacactacaggtg
gtgaacatggaggagcaggcagctctgggtctgggcgagctccagctggtccaggttcct
gtttctgcctccactgtggaggccctgcagcaaggcacctttgtagacactactgctatg
ccaaaggacggcgaccccgtcatctgccacaccctgccactgcccgagggctttcaggtg
gtgaaggttggagctaatggagaggttgagacagtggagcaggaggagggagaagcccca
actgaagagcaggatgacgaggaggtggggaaccagatgttggaagaggtggaggatgaa
cacattcagcctcaaaacgaggacccaagctgggctaaagaccccgactatcaaccccca
tctacagctaatagaaagttcaaaaagggtaagagtagcctgcgttacactgaaggagat
aaggacatggacgtcagtgtctatgactttgaagaggagcagcaagaaggcctcctgtct
gaggtcaatgctgagaaagtagtcggcaacatgaaaccacccaaacccaccaagatcaag
aagaaaggagtgaagaagacgtttcagtgtgagctgtgtagctacacctgcccccggcgc
tccaacctggatagacacatgaagagtcacacagacgagagacctcacaaatgtcacctg
tgtggaagagccttcaggaccgtcaccctgctcagaaaccatctcaacacacacactgga
actcgtccacacaagtgcacggactgtgacatggcttttgtgaccagtggagagttggtg
cgtcatcgtcgctacaaacacacacatgagaagcccttcaaatgctccatgtgtgactac
gctagtgtggaggtgagcaaattaaagcgtcacatccgttcccacaccggtgagcgtccg
ttccagtgcagtctctgcagctacgccagcagagacacgtacaagctgaagagacacatg
aggacacactcaggagaaaaaccttacgagtgctacatctgccacgcccgattcacccag
agtggaaccatgaagatgcacattctgcagaaacacacagagaacgtggccaagttccac
tgtccacactgcgacactgtcatcgcacgcaagagtgacttaggagtccatctgcgtaag
cagcactctttcatcgagactgggaaaaagtgtcgctactgtgacgccgttttccacgag
cgctacgctctgatccagcatcagaagtcccacaagaacgagaagaggttcaaatgtgag
atgtgcgactactgctgccgccaggagcgtcacatggtgatgcaccgtcgaacccacacc
ggagagaaaccgtacgcctgcagccagtgtgagaagaccttcagacagaagcagctgctg
gacatgcacttcagacgctaccacgaccccaacttcatccccaccgccttcgtctgccct
aagtgcagcaagaccttcactcgcaggaacaccatggctcgccactctgagaactgcaac
ggtgaggtggatgatgccgagaatggatctccaaccccgaagaaagggaggagaggaagg
aagaggaagatgaggaccaggagagatgaggatgacagcgaggaggatcatggagaactg
gatgaggaggacgaggatgagggtgagggtgaggaagaagaactgctacaagaagaggag
gagccagaggacatggaactggaccaggcccctgccgccatcccagtcccggctcctgac
gagccaccagtcaagagaaaacgaggccgacccccaaagaacgcccccaagcccccaaca
cccagcaagtctgcccaggtgtctgccaaggctgctgcttctgctgctgccatcattcag
gtggaggacgagagcaccggagcggtggagaacatcatcgtgaagaaggaagagggcgac
ggctctgcagcccccctggagcaggagggagccctgacggtggaggggctggggctggac
ggggcgggggtggagactgtggagctggttgtgaacgaggagacagcggccgccgccaac
ggagacctgacgccagagatgatcctcagcatgatggaccggtga
DBGET
integrated database retrieval system
