Trematomus bernacchii (emerald rockcod): 117491724
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Entry
117491724 CDS
T09643
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
Ank_3
SH3_9
PDZ_6
Ank_5
PDZ
SH3_1
FERM_f0
2C_adapt
Motif
Other DBs
NCBI-GeneID:
117491724
NCBI-ProteinID:
XP_033997707
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MPLRPAAGKHEPPSPPRQDQQQQHTHTHSPTFTHPYTHTANGSQGASTDSGSSREEDSGV
PIPAFCPVAERSHSARAPMEEPTGNTVVIRIGIPDLQQTKCMKFNVDAPIWLSKQQILCT
LNQSLKDVLNYGLFQPAYNSKAGKFLDEERQLREYPFPSIAPVPYLEFRYKRRVYTQTYL
DEKQLSKLHTKANLKKFMEYVQLRNIEKVSRFLEKGLDPNFHDPDTGECPLTLAAQLEGC
AELIKVLKSGGVHLDYRTKDGITALHKAVRSKNHTALITLLDLGASPDYKDSRGLTPLYH
SSMVGGDPYCCELLLHDHAQVGCADENGWQEIHQACRYGHVQHLEHLLFYGADMSSQNAS
GNTALHVCALYNQDSCARVILFRGANKEIKNYNSQSAFQVAIIAGNFDLAEIIKVHKVSD
VVPFRETPSYTSRRRMTAGPLPSPRSLLRSASDNNLNGDHDHIHGQAPREPRGRQGHSPV
PSLRSLPAFGQQHSSLGESRHGEIPDSSLQSTGSSRSSHSRSPSLHHMHEEDRPVPRRSH
SHGYPHGHSHRGRLSPGSVQRDPSPPHHTPPALTGPRGPKRKLYSAVPGRTFIVVKPYTP
QGEGEIQLNRGERVKVLSIGEGGFWEGTVKGRTGWFPADYVEEVQMRQFDPRLETREDRT
KRLFRHYTVGSYDNFTSYSDYIIEEKNAVLQKKENEGFGFVLRGAKAETPIEEFTPTPAF
PALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNRLLMKVVSV
TRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRRRGERLDEMLASQES
ILRSQPSEADYRAATVKQRPTSRRITPAEISSLFERQGMTLHGGLQPGIERGHIPLPKGM
SRTKSFGATEEDRLSALAAEHRFPRSSSMTDSLREHSQPHPIPPPPQTAPPPPPYYLDTG
PPPAFCPPPPPSRTHSQGHEPGGRSSFKPSSLDLPYEAAQRQATHLERQKKARSMIILQD
SSHLPVEPTEIPRPSAATPPERIKRKGRVIDNPYANVGQFSIGLFTPTKPQRKKSPLVKQ
LQVEDAQEKASLALAAAHSRESSPSGRHSHTHGHTHTSRADYYQQQLMAERERLRAQGEM
MFQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGASLVSSDSPSLTQSHSIDER
MLTRELGQLPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAARERALTSQSPTGSP
EPRTKQDRAGHGVLFMDPQTKESPHGEGATTTPPFSPKSAKAGGYGVVSSPTSILVPQPT
KPQWVTSQSPVSFRQEMEARVEERKEEKRLEDQKSMLISIMDTSQQKTAGLIMVHATSNG
QSVGVDPHLEQTPAPTSTEPSKSLSPRAKSPSPSTSQPQAQLQAQPHTQRPASPAQDKSL
AQGSSEEDVDPYTVTLPPAMLSSSDEETREELRHIGVLPPPDEFANGMQAQGTPTLPASS
PTTPTTPTPQTLSSPKTPTVTPTQPQPPQLAPPPSAAAVSGKPSDPLEPPPVGQSGSAAD
SGVEEADTRSSSDRERDLHLETTSTVSTVSSMSTLSSESGEPADTHTTHTSYAEGLTFVL
DKPPVPPKPRLKSQIGGSKGPVTFRDPLLKQSSDSELLSQQQAAALAAVAAGGAGLPFGG
SASVTGLGPTKPRYLFQRRSKLWGDPVEPRGPGVGLGIGSLGNLGGLGLGLGVDDGAKPS
VMGELSSRLQQLNKDTRSLGEEPLGASLDPGRKSPVTGARLFSSLGELHTISQRSYGTTF
TIRPGSRYPVTRRSPGSGSPDRGDPFGRYSGFGLPTSPTTPPQTILKSSSLSLPQEPKEV
RFVMRSSSAHSHSRSRSPSPSPSHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLESINL
GEHRAGFQEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALKMLLES
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagccctccacggcaggaccag
cagcagcagcacacacacacacactcacccacattcacacacccttacacacacacagca
aacggcagccagggggccagcactgacagcggcagctcccgggaagaggacagcggcgtt
cccattccagctttctgtcccgttgctgagcggagccacagtgccagagcacccatggag
gagccgacaggcaacacggtggtcatccgcattggaatcccagacctgcaacagacgaaa
tgcatgaaattcaatgtggatgctcctatctggctgtcgaagcagcagatcctgtgtact
ctcaaccagagcctgaaggatgtactcaactatggcctcttccagccggcctacaacagc
aaggctggcaagtttctggatgaagagagacagctaagggaataccccttcccctccatc
gctcctgtaccttacctggagttccgctataaaagacgtgtctacactcagacttacctg
gatgaaaagcagctgtcgaagctccacaccaaggcaaacctgaagaagttcatggagtat
gtgcagctgaggaacattgaaaaggtctcaaggttcctggagaaaggcctggaccccaac
ttccatgatccagacacaggagaatgtcctctaacgctggcagcacagctggagggatgt
gcagagctcatcaaggtgctgaagagtgggggggtgcatctggactacagaacaaaagat
ggcattactgccctacacaaggctgtgcgcagcaagaaccatacagcgcttataacactg
ctagacttgggtgcatcgcctgactataaagacagtagggggttgactccgctctatcac
agctccatggtgggaggagacccctactgctgtgagctgctgctgcacgaccatgcccag
gtcggctgtgcggacgagaacggctggcaggagatacaccaggcatgccgctatggccac
gttcagcacttggagcacctgctgttctacggagctgacatgagctcccagaatgcatct
ggaaacaccgccctccatgtgtgtgctctctacaaccaggacagctgtgcacgagttatc
ctgttccggggggccaataaagagataaagaactacaacagccagagcgcctttcaggtg
gctattatagcaggaaactttgatctggctgaaatcataaaggtccacaaagtatcagat
gttgtgcctttcagggagaccccctcttacaccagccgtcgacgtatgacagcgggaccc
ctgccctcgccacgatctctgctccgctctgcgagtgacaacaacctgaacggggaccac
gatcacatccacggtcaggcccccagagaacctcgcggtcggcagggtcactcccccgtc
ccctcactgcgcagcctgccagctttcggtcagcagcacagcagcctcggagagagccgt
catggagagatccctgacagcagtctccagagcacaggtagctccagatcctcccattcc
cgctcgccttcgctacatcacatgcacgaggaggacaggccggtccccaggaggtcccac
agccatggataccctcatggacacagccatcgtggaagactcagccctggctcagtgcag
cgagacccaagccccccacatcacacccccccagcgctgacaggcccccgcgggcccaaa
cggaaactctacagcgctgtcccgggacgtaccttcatcgtggtcaagccctacacgcca
cagggggagggagagatccaactcaaccgaggagaaagagtcaaagtgctgagtataggg
gaaggaggattctgggaaggcactgtcaaagggaggacaggatggtttccagcagactat
gtggaagaagttcagatgaggcagtttgacccgcggctagagactcgggaggaccgcact
aagagactgttcagacactacactgtgggatcctacgacaacttcacctcatacagtgac
tatatcatagaagagaaaaatgctgttttgcagaagaaagaaaacgaggggtttggcttc
gtcctgcggggagccaaagctgagacgcccatcgaggagttcacccccaccccagcgttc
cccgcccttcagtacctggagtctgtggatgtggagggagtggcctggagggctggtctg
aggacaggagacttcctcatcgaggtgaacggggtgaatgtagtgaaagtgggccataag
caggtggtgtccctgattcggcaggggggcaaccggctgctgatgaaggtggtgtccgtc
acacgcaagcctgagtctgaggaggtcgtccgcaagaaagctcccccgccacccaagaga
gcccccagcaccaccctgacgctgcgctctaagtccatgaccgctgagctggaagaactg
gcttctgctcggaggagaagaggagagagactagatgagatgttggcatcacaggagtct
atcttgcgttctcagccctcagaggcagattacagagcagctactgtcaaacaaaggcct
accagcaggagaattacaccagcagagatcagttcactgtttgagagacaagggatgact
ctacatggaggtctgcaacccggcattgagagaggtcacataccgctacccaaggggatg
tccaggaccaagtcttttggtgccactgaggaggatcggctgtcggcccttgcagccgaa
cacaggtttccccgcagttcctctatgacagacagcctccgagaacactctcagccccat
cccatccctccacctccacaaactgcacctcctcctcctccctattacctggacactggt
cctcccccagccttttgtccccctcctcccccgtctaggacccacagtcagggccatgag
cctggaggacgctccagcttcaagccttcatccttggatctgccgtacgaggccgctcag
cgacaggccacacacttagagagacagaagaaagcgcgctccatgatcatccttcaggac
tcttcacatctacctgtagaaccgacagaaatcccccgtccttctgctgctactccacct
gagcgaatcaaaaggaagggtcgggttattgacaacccttatgccaatgtgggtcaattt
agtattggactgttcacacccaccaagccccagaggaagaaaagtccactggtgaaacag
ctacaggtggaagatgcacaagaaaaagccagtttggccttagctgctgcccactcccga
gaaagctctccctcaggacgacactcacacacccatggacacacacacaccagccgtgca
gactactaccagcagcagctgatggctgagcgagagcgtctgcgtgcccagggagagatg
atgtttcaggggaagggtcccttcgccgctgctatagctggagcagtgaaagatcgtgag
cgtcgtctagaagaacggagaaaatccactgtcttcctttccgttgggactatggagggg
gcgtccttagtcagctctgactccccctctctgactcagtctcactccatcgatgaacgg
atgctcacccgagagctgggacagctgcctccccctgccttggccctgagcccctcacct
agtgggaccacctttatccatccgctcacaggaaaacccctggaccctaactctccactg
gctcttgcgctggccgcaagggagagagcactgacctcccagagcccgacgggcagccct
gagccgaggactaaacaggatcgagcaggccatggcgtgttgttcatggaccctcagacc
aaagagtctccacatggggaaggggctaccacaactccccctttttcacctaaaagcgcc
aaggcaggggggtatggagttgtttcctccccgacatctattttagttccccagcccacc
aaaccacagtgggtcacatcacagtcaccggtatctttccggcaggagatggaggccaga
gtagaggagaggaaggaggagaagagacttgaggatcaaaagagtatgttgatcagtatt
atggacacgtcacagcagaaaacagcagggcttattatggtccatgctaccagtaacggc
cagtcagtcggggtagatccacacctagaacagacacctgcccccacgtccacagagccc
agcaagtctctaagtccaagggctaaatcccccagcccctctacctcgcagccccaggcc
cagctccaggcccagcctcacactcagcgtcccgccagtccagcgcaggacaagagtctg
gctcagggaagctccgaggaggacgtggacccctacaccgtgaccctgcctcctgcaatg
ttgtcctccagcgatgaggaaacaagagaagagcttcgtcacattggagttcttccacca
cccgatgagttcgctaatggcatgcaggcacaggggacgccaactctacctgcctcctct
cccaccacgcctacaacaccaacaccccaaactctgtcatccccaaaaactccaactgtg
acgcccacccagcctcagcctccccagctggcacctccacccagtgcagcagctgtctca
gggaagccctctgaccctctggagcccccaccggtgggtcagtccggctctgcggctgac
tcaggtgtggaggaggccgacacgcgcagctccagtgacagagagcgagacctccatctc
gagaccaccagcaccgtctccacagtttccagcatgtccaccctgtcctcagagagcggc
gagcctgcagacacacacaccacgcacacctcctatgccgaagggctgacttttgtgctc
gacaagccgccagtgcctcctaagccccgactcaagtcccagataggaggcagtaaaggc
cccgtcaccttcagggaccctctgctgaagcagagctccgacagcgagctgctctcacaa
caacaggctgctgccctggctgctgttgctgcaggcggagctgggctgcccttcggcggc
tcggcctcagtgacaggactcggccccaccaagccgcgctacctcttccagcggaggtcc
aagctgtggggggacccagtggagcctcgtgggccaggggtggggctaggtattgggagt
ttgggaaatctaggcgggctgggattgggacttggtgtagatgatggagcaaaaccttct
gttatgggagagctcagttcacgactacagcagctaaataaagacactaggtcactggga
gaggagccgctgggagcatcacttgacccggggagaaagtcacctgtgacaggtgccaga
cttttcagcagcctaggcgagctccacaccatttctcagagaagttatggcaccaccttc
accatccgccctggcagccgttaccctgtcacccgacgcagccccggttcaggctcccct
gatcggggtgacccattcggacgatactcaggcttcggcctaccgacctcaccgactaca
cccccacaaaccatcctcaaatcctccagcctcagcctaccccaggagcctaaagaggtc
cgctttgtgatgaggagctccagcgcccattcccattcccgctctcgctccccgtcccca
tccccctcccattctcccgggctagggtcaccacttttagccctccggccctttcaccag
aaacccctccacctctggaataagtatgacgttggagactggctggagagcatcaatctg
ggagagcacagagcaggctttcaggaacacgagatcgaaggctctcacctcccagctctg
accaaggatgactttgcagagctgggagtgacgagagtgggacaccgcatgaacatcgaa
cgggcgctaaagatgctgctggagagctga
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integrated database retrieval system
