Trematomus bernacchii (emerald rockcod): 117491762
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Entry
117491762 CDS
T09643
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117491762 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117491762 (ddx11)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117491762 (ddx11)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117491762 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
117491762
NCBI-ProteinID:
XP_033997744
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MENGRDTFPFPYQPYNIQEQFMQALYSALDQGKVGIFESPTGTGKSLSLICGALSWLTDF
EEKRKQESAALLHEGEAALSTVTAPSSTSSSSAEPDWITDFVKKKADRDLVSKLKDEELK
RKKREERLEMIRNNVQLKYAMKRKSCEDEEAIKLLQLSKEEQTEPQGDQEDEELIIAEYE
SDDESKTKSRFSATEEDDDLVEEHVTKIYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLG
SRQNLCINDEVRRLGSSQRINDRCLEMQKNKHDKHQEEGVKRKRGPAKSVCPYNKATALQ
KMRDDVLGKVHDIEEMLKLGRETHSCPYYATRLSVPPAQLVVLPYQILLHEATRKAAGIQ
LKGQVVIIDEAHNLSDTLSSIHSAELTGAQLCRAHSQLTQYSDRYKSRLKAKNLMYIKQI
LFVVEGLVRVLGGKVGQNPQTQTTQTGTEMLTINNFLFKAQIDNINLFKLPRYFEKSLIS
RKLGGFVEKYAGSGVSLHTQNSNKENRRTEGLNRYLQTLQSNQSTTPGSSAEQQGSEAEK
VLSASPMMQVEGFFMALTNSNTDGRVVVRREGTVSESSVKFLLLNPAVHFAQVLEQCRAV
IIAGGTMQPVSDFKQELLFSAGVGEERITEFSCGHVIPPENILPLVLCSGPSGQELDFTF
QSRDTPRMMDETGRILSNICNVVPGGVVCFFPSYEYSRRIVSHWEASGALSRLANKKKIF
QEPKKANQVEQVLSEFSRCIQRCAADPGGLTGALLFSVVGGKMSEGINFSDDLGRCVVMV
GMPYPNIKSPELQEKMSYLDKHLPHNGGKSPGQALIENQCMKAVNQSIGRAIRHRGDYSS
IVLCDRRYARPATLSKLPEWIKERTSTHTTFGPAFAALRKFFLEKKQKQV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggcagggacacatttccatttccctatcagccctacaacatccaggagcag
tttatgcaagccctgtacagtgctcttgaccagggcaaagttggaatctttgaaagtcca
actgggacgggcaaatctctgagtctgatatgtggagcgctgagctggctcactgacttt
gaggagaagaggaaacaggagtcagctgctctgctgcatgaaggagaagcagctctctcc
actgtcactgctccatcctccactagcagctcatctgcagagccagactggatcactgat
tttgttaaaaaaaaagcagatcgtgacttggtgtcaaagttgaaggacgaagaattgaaa
agaaagaagagggaagagcgattagaaatgatcagaaataacgttcaactgaagtatgca
atgaaaagaaaaagctgtgaagatgaagaggcaataaaattgctccagctcagtaaagag
gaacaaaccgagccccaaggagatcaagaggacgaggagctcataatcgcagaatatgag
agcgatgacgagtcaaagaccaagagcagattttctgctactgaggaagacgacgatctg
gttgaagaacatgttactaagatttactactgcagtcgcactcactcccagctggcccag
tttgtccatgaggttcaaaagagtcccttcagcaaggacatcagtctggtcaccctgggc
tcacggcagaatctgtgtatcaacgacgaggtgcgacgccttggcagcagccaacgcatt
aatgaccgctgcttggagatgcagaaaaacaaacatgacaagcatcaggaagagggtgta
aaacgtaagcggggcccagcaaagagtgtgtgtccctataataaagctacggctctgcag
aagatgagggacgacgttctggggaaggtccacgatatagaagagatgctcaagctgggc
agagagacacactcatgtccgtactacgccacgcgcctctctgttccccctgctcagttg
gtggtgctgccctatcagattttgcttcatgaagcaacaaggaaggcagcagggatccag
ctgaagggtcaggtggtgatcatagatgaagcgcacaatcttagtgacacgctctcctct
atacacagtgcagagctcactggagcgcagctatgccgtgcccactcgcagctcacccag
tattctgaccgctacaagagcagactgaaggcaaagaacctcatgtacattaaacagatt
ctgtttgtggttgaagggcttgtccgggtgctgggaggtaaggtggggcagaatccacag
acccagactacacaaacaggaacggaaatgctcaccattaacaacttcctcttcaaggct
cagatcgacaacatcaacttgtttaagttgccgagatactttgagaaaagcctgatcagc
agaaagctgggcggctttgtggagaagtatgcaggatcaggagtgagtctgcacactcag
aactccaacaaggagaaccgccgcacagaaggcctgaaccgctacctgcaaacgctgcag
agcaaccagagcacaacgccagggtcttcagctgaacagcaggggtcagaggcagagaaa
gtgctctctgcatctcccatgatgcaggtggagggtttcttcatggctctcaccaacagc
aacacagacggcagagtggtggtgcggagagaaggtactgtttcagagagcagcgtgaag
ttcctgctgctgaatccagcggtgcacttcgcccaagtgctggagcagtgcagagccgtc
atcatcgccggaggaaccatgcagcctgtttcagacttcaaacaagagctcctattttct
gccggagtgggagaggagcgcatcactgagttttcctgtggtcatgtaattccaccggag
aacattcttcccctcgtcttgtgcagcggtccctctggtcaggagctggattttactttc
caaagcagagacactccacgcatgatggatgagacggggcgaattctctccaacatctgt
aacgtggtccccggcggcgtcgtgtgcttcttcccttcctacgagtactccagacgcatc
gtttctcactgggaggccagcggggcactgagtcgtctcgctaacaagaagaagatcttc
caggagccaaagaaagccaaccaggtggagcaggtgctgagcgagttctcccgctgtatc
cagaggtgtgctgcagatcccggcgggctcacaggagcgttgctgttctctgtggtcgga
ggaaagatgagtgagggcatcaatttctcagatgacctgggcaggtgtgtggtgatggtg
gggatgccatatcccaacatcaaatccccagagctgcaggaaaagatgtcctacctggac
aaacacctgcctcacaatggaggaaagagccccggccaagcactgatagaaaaccagtgc
atgaaggctgtcaatcaatccataggaagagctatccgtcaccgtggcgactattcctcc
atcgtgctgtgtgacagacgttacgctcgacctgcgacgctctctaaacttccagagtgg
atcaaagagcgcaccagcacacacaccacctttggccctgcttttgctgccttacggaag
ttcttcctggagaagaagcagaagcaggtgtag
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