Trematomus bernacchii (emerald rockcod): 117491794
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Entry
117491794 CDS
T09643
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03020
RNA polymerase
tben04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117491794 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117491794 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117491794 (polr3b)
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117491794 (polr3b)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117491794 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117491794
NCBI-ProteinID:
XP_033997779
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MEVLGGEFGDMTPQELAAPVDTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPLEVSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFGPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKR
GQPMVKNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVK
TRTIELIDFEKLPAGQNATIAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAVTRKPIWRHNILDADGICSPGEKVENKQVLVNKSMPTVTQAPLE
GSTQPGQPQYRDVPVSYKGSTDSYVEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDVIMNPHGYPSRMTVGKLIELLAGKAGVMDGCFHYG
TAFGGSKVKDVCEDLVRHGYNYQGKDFVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcttgggggggagtttggtgacatgactcctcaggagctggcggctcctgtc
gacaccatagaggaaaaatggaaactgttaccagcctttctaaaggtgaaaggacttgtg
aagcagcacatcgactcattcaactatttcatcaatgtggagataaagaaaattatgaaa
gcaaacgagaagatcacaagtgatgctgatcccatgtggtacctcaaatacctcaatatc
tatgttggcatgcctgatgttgaggaaagcttcaacgttaccagaccagtatctcctcac
gagtgtcgcctcagagacatgacctactctgcacccatcacagtggacatcgagtacaca
cgtggcagtcagaggatcatccgcaacgcactgcccatcggaaggatgccgatcatgctg
cgaagctcaaactgtgttctcactggaaagacgcccttggaggtttctaaactcaatgaa
tgtcctctggatccagggggttacttcatagtaaagggtcaagagaaagtcattctgatc
caagagcagctgtccaagaatcgaatcattgtggagcaggacaggaagggagcagtcgga
gcctcagtgaccagctccactcatgagaagaaaagcagaactaatatgattgtcaagcaa
ggcagattctacctgaaacacaacacgctgtcagaggacgccccgattgccatcatattc
aagggcatgggcgtggagagtgaccaggaaattgtgcagatgatcgggacggaagagcac
gtcatggcgagcttcggcccgagcctggaggagtgtcagaaggcccagatcttcactcag
acgcaggctctgcggtatctggggaataaagtgcggaggcagcgcatgtggggaggaccg
aagaagaccaagatggaggaggcccgagagctcctggcgtctctaatcctcacacatgtg
cctgtcaaagagtttaacttccgggctaagtgtatctacctggctgtgatggtgcggagg
gtgatcctggctcaagggggcaacaaggtggatgacagagattactatggcaacaaacgt
ctcgagttggctggacagctgctgtctctgctgtttgaggatctgtttaagaagttcaac
tctgaactgaagaaaatcgccgaccagatcatccccaagcagagagcagctcagttcgac
gtggtgaagcacatgcggcaggaccagatcacaaacggcatggtcaatgccatatccacg
ggcaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggtcctgtcc
cgtctctcctttatttcggctcttggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccgcgctccctgcagccgtctcagtggggcatgctgtgtccg
tctgacactcctgagggagaggcctgtggtctggtgaagaacttggctctgatgacccac
atcaccacggacatggaggacggtccgatcatcaaactggccttcaatctgggcgtagaa
gacgtcaacctgctgtgtggagaggagctctcctaccccagcgtcttcctggtcttcctc
aacggtaacattctcggagtgattcgggatcatcagaagctggtcagcaccttcagactg
atgcgccgggcgggtttcatcaacgagtttgtatcaatctccaccaacctgaccgaccgc
tgcgtctacatctcctctgacggaggacgtctctgcagaccttacatcatagtgaagagg
ggacagccgatggtgaaaaacaaacacattgaagatctgtcacagggctacagaaccttt
gaagacttcctgcacgagggcctggtggagtacctggatgtaaatgaggagaatgactgt
cagatcgccctttatgaacacatgattaacaaagacacaacacacttggagatcgagccc
ttcacgctgctcggggtgtgtgctggcctcattccctacccccaccacaaccagtctccc
aggaacacataccagtgcgctatgggcaagcaggccatgggtactattggctacaaccag
aggaaccgtattgacaccctgatgtacctgctggcgtaccctcagaagcccatggtcaaa
acaagaaccatcgagctgattgactttgagaagctgccggccggtcagaacgccaccatt
gctgtgatgagctacagcggctacgacattgaggacgctctgatcctcaacaaagcctcc
cttgatagaggatttggccgttgcctggtctataaaaatgccaaatgcacgctgcgacgt
tacaccaaccagaccttcgacaaggtgatggggcccatgctggatgccgtcacacgaaag
cccatctggaggcacaacatcctggatgctgacggcatctgctctcctggtgagaaagtg
gagaacaagcaggtgttggtgaacaagtccatgccaaccgtcacccaggcgccactggag
ggcagtacccagccaggccagccgcagtacagagacgtgccggtcagctataagggctcc
acagactcgtacgtcgagaaggtcatgatctcatccaacgctgaagatgcttttctcatc
aagatcctcctcaggcagaccaggaggccagagataggagacaaattcagcagtcgacat
ggacagaaaggtgtttgtggcctcatcgtccctcaggaggacatgccgttctgtgacacg
ggcatctgtccagacgtcatcatgaaccctcacggatatccctccagaatgacggtgggg
aagttgatcgagctgctggccgggaaggcgggggtcatggacggatgcttccactacggc
acggcgttcggaggcagcaaggtgaaggacgtgtgtgaggatctcgtccgccacgggtac
aactaccagggcaaagactttgtcacctcaggaatcactggggaacctctggaagcgtat
atctacttcggaccggtgtactatcagaaactgaagcacatggtgctcgacaaaatgcac
gccagagcccgaggccccagagccgtcctcaccaggcagcctacagagggtcgctccaga
gacggagggctgcgtctgggcgagatggagcgcgactgtctgatcggctacggagcgagc
atgctgctgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgcggg
cagtgcggcctgctgggatactcagggtggtgtcactactgcaagtcctcctgccacgtc
tcctctctgcggatcccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatcccccgactcaaactggcacgctacaacgagtga
DBGET
integrated database retrieval system
