Trematomus bernacchii (emerald rockcod): 117491850
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Entry
117491850 CDS
T09643
Symbol
cd44b
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117491850 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117491850 (cd44b)
04090 CD molecules [BR:
tben04090
]
117491850 (cd44b)
00535 Proteoglycans [BR:
tben00535
]
117491850 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117491850 (cd44b)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117491850 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
117491850 (cd44b)
Exosomal proteins of colorectal cancer cells
117491850 (cd44b)
Exosomal proteins of bladder cancer cells
117491850 (cd44b)
CD molecules [BR:
tben04090
]
Proteins
117491850 (cd44b)
Proteoglycans [BR:
tben00535
]
Cell surface proteoglycans
Others
117491850 (cd44b)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Hyaluronan
Cell surface receptors
117491850 (cd44b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
DUF6480
Motif
Other DBs
NCBI-GeneID:
117491850
NCBI-ProteinID:
XP_033997847
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MWTLLLGVTFGLLASSRSEQLQVNSRGCSFARVFLAEGESRHALTFEMAQMVCEQLQSVL
ASQEQVQQAFENSMQTCRNGWTSNISTAILRQDSHENCANKSTGLIINTHVNVDDPYDAY
CYDETVGPEKNCTKRFVLKATPEPQESTTEGLEETTTKPEDASGSEGGDPTAAPGEDALT
EGSETTLSDSTISLEETETATEGPAVEETTVEFDLGSGMMPSGEGKNTPTAPVGEPKYTQ
APTEEGHDGEDVTIESPPEQPNPNGKGRVLGPTEQGGGSSNWLVILVVIVAVAAILLVCA
AVVKRKSWCGQQQTLMITSKDGGEGNGAAASASSSHAQEREQEMVTLMNKEKITENGNTE
EFTVIKLEESPDKEQLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcttctcttgggggtcaccttcggattactggcctcctccaggtccgaacaa
cttcaagtgaattcccgcggctgcagctttgcacgggtatttctggctgagggggagagc
cgtcacgctctgacctttgaaatggctcaaatggtgtgtgagcagctgcagagcgtattg
gccagtcaagaacaagtccagcaggcctttgaaaactccatgcagacatgcaggaatggc
tggaccagcaatatcagtactgccatcctcagacaggattcccatgaaaactgtgcaaac
aagtcgactggcctcattattaatacacatgtaaacgttgatgatccttatgatgcctac
tgctatgatgaaacagttgggcctgagaagaactgcacaaaacgatttgtattaaaagcc
acaccagagcctcaggagtcaacaacagaaggcctggaagagacgactacaaaacctgag
gatgcttctggcagtgagggtggggaccccacagcagcccctggggaagatgctcttact
gaggggtctgaaacaacgctgtcagactccactattagtctagaagagacagagactgcg
actgagggccccgccgtggaagaaacaactgtggagttcgaccttggatctggtatgatg
ccatctggagagggaaagaacactccgacggcccctgttggagagcctaagtatacacaa
gctcccactgaagaggggcatgatggagaagatgtcacaatagaatctccaccagaacaa
ccaaatcctaatggcaaaggacgggtgctgggtcctactgagcagggcggaggttcatca
aactggctggttatccttgtagtgattgttgcagttgctgctattcttctcgtgtgcgca
gctgttgtaaaaagaaagagttggtgtggccaacagcagaccctgatgatcacgtccaaa
gatggcggcgagggcaacggtgctgcagcatcagcatccagctcgcacgcccaggagaga
gagcaggagatggtgaccctgatgaataaggagaagatcacggagaacggcaacacggag
gagttcaccgtcatcaagctagaggagtcgccagataaagaacagctggcgtga
DBGET
integrated database retrieval system
